XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TCACCTGTACCATACTGAATGGCTGAGAAACACCTGAAGATTATGGGGAT
CCATCCCATAATCAGCCTCCAAACGCTGACACCATTGCATACACTAGCAA
GATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTTGAGAGACTATGCCG
GGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATGGGT
CACACGGCCCCCAATGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGG
GGTCTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCTG
GAGCTCTTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGGCCA
TCACTGGAAAGAGAGGCCCATTAGTCTTGCAAACTTTATATGCCCCAGTA
CAGGGGAACGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTGGGAGAGTGAG
CGCNTTTTNTCTTNTTTTTTTTTTTTNTTTNCCCCCTTTTCTCTTTCTCT
TTCTTCCCTCTTCCCTCCCCTTTTTTTTCTTTCCCCCCCGTTTTCTCCCC
CCCTTTTTTTCTCTTTTTTCCTCCCCCTCCTCTTTTTTTTTCTTTTTCTT
TCCCCCTTCTCCCTTCTCCCTTTTTTTTTTTTCCTTTTCTCCCCTCTCTT
CTCCCTTTTTCTCCTTTTTCCCTTTTCGCCGCTTCCTTTCCCGCCCGTG

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCCCTTTATTGTGGAAAATGCAGAAAAGAG
AATGATATCCATTATCAACAAGCCCATTCCAAGGTAATTATCATTTATTT
TCGATAGTTATTTCTAGAATTCTAAACATTTAAGAATATGTCCTCTATGT
TCAGGTCCCAGCACAGACCTGGCACTCAGCAGGAGTTAATGCATGCTGAC
TGCCGTCATTTGCTATCAATTATATATCGGATACTTTAGCAAGTAGTAAT
CATTTGAGGTCTACCATCTATGTGGGATATGTGTGTCACATTTTAGCCAA
TCAATTTAATGCCTTATTTTCCAAGTTGGTAGGTTTTGGTATAATATTCA
TTTTTCCTCAAAAGTTTTCTACTAAACTAATAAATATTTCCATGAGTTTT
TAAAGTTCTCACAAAAGGATTAAAAACTAGCTACAAACAATATGTGATAT
TTTCACTTAAAAGAATAGAAAATGATAAGCTTAAATATTTAATGCCATTT
TTTTTCTTTCTTTCTTTTTTTTTTTTTTTTCTTTTGGGTTCTCGAAAAAG
GGGTTCTCTGTATAACCCTGGCTGCCCTGGAAATTCTTCTGGAAACCAAT
TTGGCTTCTAAATTAAAAATCCCTCTGCCTCTCGCTCCCTAAAAGGCGCG
GATAAAAGGTGGTGTTGCCCCATTCGTCCGGCTTTAAGGTTGTATTCTTG
ATTTTTTAAGAA

Query= MSMg01no341_c13.g1 MSMg01no341_c13.g1 CHROMAT_FILE:
MSMg01no341_c13.g1 PHD_FILE: MSMg01no341_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:20 2005
         (488 letters)



>mm_chr5_45899831_45900719
          Length = 889

 Score =  930 bits (481), Expect = 0.0
 Identities = 487/489 (99%), Gaps = 1/489 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccctttattgtggaaaatgcagaaaagagaatgatatccattatcaacaagcccattcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ccctttattgtggaaaatgcagaaaagagaatgatatccattatcaacaagcccattcca 630

                                                                       
Query: 61  aggtaattatcatttattttcgatagttatttctagaattctaaacatttaagaatatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 629 aggtaattatcatttattttcgatagttatttctagaattctaaacagttaagaatatgt 570

                                                                       
Query: 121 cctctatgttcaggtcccagcacagacctggcactcagcaggagttaatgcatgctgact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 cctctatgttcaggtcccagcacagacctggcactcagcaggagttaatgcatgctgact 510

                                                                       
Query: 181 gccgtcatttgctatcaattatatatcggatactttagcaagtagtaatcatttgaggtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gccgtcatttgctatcaattatatatcggatactttagcaagtagtaatcatttgaggtc 450

                                                                       
Query: 241 taccatctatgtgggatatgtgtgtcacattttagccaatcaatttaatgccttattttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 taccatctatgtgggatatgtgtgtcacattttagccaatcaatttaatgccttattttc 390

                                                                       
Query: 301 caagttggtaggttttggtataatattcatttttcctcaaaagttttctactaaactaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 caagttggtaggttttggtataatattcatttttcctcaaaagttttctactaaactaat 330

                                                                       
Query: 361 aaatatttccatgagtttttaaagttctcacaaaaggattaaaaactagctacaaacaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aaatatttccatgagtttttaaagttctcacaaaaggattaaaaactagctacaaacaat 270

                                                                       
Query: 421 atgtgatattttcacttaaaagaatagaaaatgataagcttaaatatttaatgccatttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atgtgatattttcacttaaaagaatagaaaatgataagcttaaatatttaatgccatttt 210

                    
Query: 481 tttt-cttt 488
           |||| ||||
Sbjct: 209 tttttcttt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 889
Length adjustment: 10
Effective length of query: 478
Effective length of database: 879
Effective search space:   420162
Effective search space used:   420162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)