AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCTCTTACCGTTTTTGATCATTGTTCTGTCCTTCACAAATGAGTCT
AGCTTGAACTTACTTATGGAGTATAATCCATGTCTATTTTAAACTTACTT
ATAAAAGGCTATTACTTTCTTAAGCTGCTTTTGATAACATTTCTTGTATA
TCTATTTTAGAAGTATTTTGTTGCATTTTAATTAGTTGTATATTGTACCG
GTTAGTTTTTGTCAATTTGGTATAAAGACAACTGAGAAGAAGAATACTAA
CTGTGCCTCCCTTCGATTTGCCTATGGGCATGTTTTCCTTATGCTAACTG
ATATAGGAGGGCAAAGCTCACTGGAAGCTGTGGACAGTGTCATCTGTGAC
CTGGTGGACCTGAGTTGTCTGAGTTGTATAGGAAAAGCAGCTGCATGTGA
AACTGAAGCAATCTGACAGACAGCCTTTCTTCATGGTTTTCCCTTCACTT
CTTGCCTTTACGTTCTCATCTTGAGCCCAGACTCCTCTCAACGATGGACT
ATAACCTGTGAATTACACAAAGCTTTCCCTCCCCTAGTTATTTTTTACTT
TGGCGCTTATCCCACCCATAGAAACAACCTACCTCCAAAGAATACTTTGT
TTTCTCCTGCAACAGAATTCAACCTCGCCTTTCCTTATAAAAACTTATAC
GCCCATATGACATGACTGGCCTTAACTTCCCTTTCCCCCCTTTCCCCTG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTAACTGAGGAAACTCGAAGGACTCAGAA
ACACCTAAAGAAATGTTCATCATCCTAAGTCATCAGGGAACTGCAAATCA
AAACGACCCAGAGATTTCACCTCACCAGTCAGAATGGCTAAGATGAAAAA
CTCAGGAGACAGCAGATACTGGTGAGGATGTGGAGAAAGAGGAACACTCC
TCCATTGATGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTC
TGGTGATTCCTCAGAAAATTGAACAAAGTACTACCTGAGGACCTAGCTAT
ACCACTCCTGGCATATACCCAGAAGATGCTCCAACATGTAATAGGGACAC
CTGCTTCACTATATTCATAGCAGCCTTATTTATAATAGCCAGAATTTGGA
AGGAACCCAGATGTCCCTCAACAGAGGAATGGATACACAAAATGTGGTAC
ATTTACACAATGGAGTACTACTCAGCCTTTAAAAACAATGACTTCATGAA
ATTTGGAGCATTGGATGGAACTTGAGAATATCATCCCGAGTGAGGTGACT
TCGACCCCAAGAAACAAATATCCTATTTACTGTTTAGTGGATATTAGCCC
TAATGGTTCAGATACCCGAAATTTCCTTCCCGTACCCTATGAATTTCTAT
AACAATGTAACCCCTCATATTGGTTGTTTTCACCGCCTTTTTACAACTC

Query= MSMg01no341_e10.b1 MSMg01no341_e10.b1 CHROMAT_FILE:
MSMg01no341_e10.b1 PHD_FILE: MSMg01no341_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:29 2005
         (458 letters)



>mm_chr5_12442978_12443835
          Length = 858

 Score =  816 bits (422), Expect = 0.0
 Identities = 446/454 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctcttaccgtttttgatcattgttctgtccttcacaaatgagtctagcttgaa 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctcttactgtttttgatcattgttctgtccttcacaaatgagtctagcttgaa 264

                                                                       
Query: 65  cttacttatggagtataatccatgtctattttaaacttacttataaaaggctattacttt 124
           |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 265 cttacttatgaagtataatccatgtctattttaaacttacttataaaaggctaatacttt 324

                                                                       
Query: 125 cttaagctgcttttgataacatttcttgtatatctattttagaagtattttgttgcattt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 cttaagctgcttttgataacatttcttgtatatctattttagaagtattttgttgtattt 384

                                                                       
Query: 185 taattagttgtatattgtaccggttagtttttgtcaatttggtataaagacaactgagaa 244
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taattagttgtatattgtacaggttagtttttgtcaatttggtataaagacaactgagaa 444

                                                                       
Query: 245 gaagaatactaactgtgcctcccttcgatttgcctatgggcatgttttccttatgctaac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaagaatactaactgtgcctcccttcgatttgcctatgggcatgttttccttatgctaac 504

                                                                       
Query: 305 tgatataggagggcaaagctcactggaagctgtggacagtgtcatctgtgacctggtgga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgatataggagggcaaagctcactggaagctgtggacagtgtcatctgtgacctggtgga 564

                                                                       
Query: 365 cctgagttgtctgagttgtataggaaaagcagctgcatgtgaaactgaagcaatctgaca 424
           ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 565 cctgagttgtctgagttgtataggaaaagtagctgcaggtgaaactgaagcaatctgaca 624

                                             
Query: 425 gacagcctttcttcatggttttcccttcacttct 458
           |||||||||||||||||||| |||||||||||||
Sbjct: 625 gacagcctttcttcatggttgtcccttcacttct 658


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space:   379904
Effective search space used:   379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)