Query= MSMg01no341_n12.b1 MSMg01no341_n12.b1 CHROMAT_FILE:
MSMg01no341_n12.b1 PHD_FILE: MSMg01no341_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:12 2005
(431 letters)
>mm_chr5_132417864_132418697
Length = 834
Score = 743 bits (384), Expect = 0.0
Identities = 411/420 (97%), Gaps = 3/420 (0%)
Strand = Plus / Minus
Query: 14 gaattcatgctaacgtctgggagctttggtgctgttctcggactcctgagggttgatcag 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gaattcatgctaacgtctgggagctttggtgctgttctcggactcctgagggttgatcag 574
Query: 74 gctcgagtgctgatcagacacaaggattgggtgattcaggtgaacaaacaactttagcaa 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gctcgagtgctgatcagacacaaggattgggtgattcaggtgaacaaacaactttagcaa 514
Query: 134 tattatttgttggggccatgttttttgggttcctttgggtttaataaatggttagtatag 193
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tattatttgttggggtcatgttttttgggttcctttgggtttaataaatggttagtatag 454
Query: 194 aagctggaataatgaagtccctctcatttctcctcattctaccttattcctgggtcccat 253
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aagctggcataatgaagtccctctcatttctcctcattctaccttattcctgggtcccat 394
Query: 254 tcaggttcaagttagctggttgaaaaaacagatggccaccatgaagcagcctgtttctcc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tcaggttcaagttagctggttgaaaaaacagatggccaccatgaagcagcctgtttctcc 334
Query: 314 caactgtgacaccatcccaacctcctaacc-cccccccc-accctccccaatactgagcc 371
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 333 caactgtgacaccatcccaacctcctaaccgccccccccgaccctccccaatactgagcc 274
Query: 372 tacaaggacacagcattgaactttttttttc-cctccttgaagaggaatgagaatgtgtg 430
||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 273 tacaaggacacagtgttggactttttttttttcctccttgaagaggaatgagaatgtgtg 214
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 834
Length adjustment: 9
Effective length of query: 422
Effective length of database: 825
Effective search space: 348150
Effective search space used: 348150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_n12.g1 MSMg01no341_n12.g1 CHROMAT_FILE:
MSMg01no341_n12.g1 PHD_FILE: MSMg01no341_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:12 2005
(402 letters)
>mm_chr5_132263162_132263963
Length = 802
Score = 731 bits (378), Expect = 0.0
Identities = 396/402 (98%)
Strand = Plus / Plus
Query: 1 atttaaaactaaggcaacaaacagcttggctgaagaaatacaaatattccttgagacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttaaaactaaggcaacaaacagcttggctgaagaaatacaaatattccttgagacaaa 260
Query: 61 catctatgaacactccaaagtggttccggatgatcccgttcctactggacccccaaagag 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catctatgaacactcctaagtggttccggatgatcccgttcctactggacccccaaagag 320
Query: 121 atggttttacttccttttagtggaggtaaagtaccttcaattctgggccgtcttggagtt 180
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 321 atggttttacttccttttagtggaggtaaagtgccttcaattctgggccatcttggagtt 380
Query: 181 tgtcttattcataactgggattttaaattacaatgtacgggacaagagtctttattttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcttattcataactgggattttaaattacaatgtacgggacaagagtctttattttag 440
Query: 241 gatagttttaaaaaccagccccctatatcataaataagaagggtaagattaccataaatt 300
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagagctttaaaaaccagccccctatatcataaataagaagggtaagattaccataaatt 500
Query: 301 gcctgcaagaaaatacaaattgctaagataaaaacacccgccagtctgccagtctcgagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcctgcaagaaaatacaaattgctaagataaaaacacccgccagtctgccagtctcgagt 560
Query: 361 ttcctgttttgacatactatatgcggcaatttggtatccaca 402
|||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 ttcctgttttgacatactatatgcggtaatttggtatccaca 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
