Query= MSMg01no342_a23.b1 MSMg01no342_a23.b1 CHROMAT_FILE:
MSMg01no342_a23.b1 PHD_FILE: MSMg01no342_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:28 2005
(244 letters)
>mm_chr5_91630575_91631218
Length = 644
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 1 ccagctttgcatggtaagtgcctttatccactgaaccactccactggctctcagctggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagctttgcatggtaagtgcctttatccactgaaccactccactggctctcagctggtt 260
Query: 61 tggggccaagagatactagtctgatattattgttcatttttcagtattaggttttaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggggccaagagatactagtctgatattattgttcatttttcagtattaggttttaaaaa 320
Query: 121 ttgtatgttacataaagtagcatataaactaccatatttgattatattctaaatatgaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtatgttacataaagtagcatataaactaccatatttgattatattctaaatatgaca 380
Query: 181 tgaacaacattagattctaaatgtattattaaaagtgtggtctcaaattatgatatctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaacaacattagattctaaatgtattattaaaagtgtggtctcaaattatgatatctta 440
Query: 241 ggag 244
||||
Sbjct: 441 ggag 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no342_a23.g1 MSMg01no342_a23.g1 CHROMAT_FILE:
MSMg01no342_a23.g1 PHD_FILE: MSMg01no342_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:28 2005
(475 letters)
>mm_chr5_91826267_91827142
Length = 876
Score = 828 bits (428), Expect = 0.0
Identities = 464/476 (97%), Gaps = 1/476 (0%)
Strand = Plus / Minus
Query: 1 tttatttgttctaaatcacacatgaaaatggtagagccaccaactgcctagcttacagct 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 676 tttatttgttctaaatcacacatgaaaatggtagagccaacaactgcctagcttacagct 617
Query: 61 agggtacacaaacctttctcctcctttccttggagtgagctgtgtggtccaactgttctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 agggtacacaaacctttctcctcctttccttggagtgagctgtgtggtccaactgttctg 557
Query: 121 aatatgaggggatacaggacagatcagctaggagaaaggccaaaggatcttcagcacaga 180
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 556 aacatgaggggatacaggacagatcagctaggagaaaggtcaaaggatcttcagcacaga 497
Query: 181 taaatgaagacattttggaggccttggagttgaccccttcctaagtttcttcttagtagt 240
||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 496 taaatcaacacattttggagggcttggagttgaccccttcctaagtttcttcttagtagt 437
Query: 241 ttgccctctaggcttctgatggacacagtatttaggtctctgcttggcctatggaatctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 436 ctgccctctaggcttctgatggacacagtatttaggtctctgcttggcctatagaatctc 377
Query: 301 cgcattgttactctttatatttcgggggaatatttgtaaagccatctctatagtttttta 360
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 376 cgcattgttactctttatattttgggggaatctttgtaaagccatctctatagtttttta 317
Query: 361 tctcattttcagcacaaaactgaccaaaaatgtagtacaggacaggctctggtctgaaaa 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tctcattttcagcacaaaattgaccaaaaatgtagtacaggacaggctctggtctgaaaa 257
Query: 421 aatgagaatttattttatctataaaacat-tactcctagtataggagctagacgag 475
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 256 aatgagaatttattttatctataaaacatatactcctagtataggagctagacgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 876
Length adjustment: 10
Effective length of query: 465
Effective length of database: 866
Effective search space: 402690
Effective search space used: 402690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
