GCGCTATACGACTCACTATATTTCAGAAATCCGCGGAATTCCTAGAATTT
TCCCAGACTAAATTTTAATCATCAAGAAATGGAAAATATGAATAGGCACT
CCCTATTAAAGGATTAAGTCAGACTTTTAAAACTTCTCCACAAAGAAACC
CCAAAGACCAGATGGCTTCACTGGAGAATTCAACTCAACATCTAAAGAAT
TAGGGCCAATTCTTCTCAAACTCTTCCAAAAAGAAAAATCAATGAGCAAG
GAACACTAGGAACTCTTCCAAACTTATTTGATGATTTCAGCATTTTTCTG
ATACAAATTTCAAAAAGACTGTAAGGAAACTGAAGACCAACATCCCTGAT
GAATACTGATGAAGAAATCACACACACACACACACACACACACACACACA
CACACACACACACACACACAGCAAACTGGATGTCCAGTGCATTAAAAGGC
CAATACAATATGACTATGTGGTATATATTCTTGCAATGCAAAGATTATTC
AGTCTACAATAATCAGTAACCGTGACAGAGAATGTGGAGAAAGTTTGCAT
GATTATCTCCACTGGGGGAGAACCAGCATCTGGGCCAGTTCCCATCCCTT
TCCCGGGGGGGGGGGGCAAAACCCCGTGGGGGTGATAACTTGACACTGCC
CCACGATTTTTTAAAACAACTCCCCTCGGGTAAAAACCAAAATAACCCCC
CCTCCCACATAACTTATCATTTGCCGGGGTCTGTTAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAACCCGCC
TGCCTCTGCCTCCCGAGTGCTGGGATTAAAAGTGTGCGCCACCACGCCCA
GCCTTTTTTTTTTTTTTTTTTTTTACTTATTTAATGTTTGATCCATGCAT
GTCAAACAGTCTCTGATGGAGGTCAAAGGACAACTTTCAGGGCTTGGTTC
TCTTCTTCCATCACATTGGTTCTGGAGAATCAAACTCAGGTCGCCAGTCC
CGGTATTCTTTACCCTGTGAGCCATCTCCCCAGCCATGGGTTCAACAAGC
CCAGCCTGTTGTCAGCAATGCTTTATTTTCCTCCCCCCAACACCAGATGC
TGTTCAGTTGTTACAATATCCAGGCAAGCAGAGGGACTGTCCCTCTCTTG
AAAAGGTTAAGAGCCTTTGGTAGGATTGGACTTCAAGTCCAGTGGTACCA
CCCCAGGGAATGCCACAGTGCAACAACTCATCCCCCACAATCTGTGTTAG
TGTCCCCACATGACACCCCAGCCATTTGAATATCAGGTCCCCAAAAGAAC
CCTGAACCCTTTGGCAGGAAGGTTTCTTCTCACCCAAACGGAGCTTCCCC
TTAAATTCCCCCTAAAAAAAAATATCATGTTGGCCCCCAAATTTCTTTTG
ATTTATCCAACAAAACCTGGTCTGGACAAAATATCCTACTTTTTTCTTCA
CCA

Query= MSMg01no342_a24.g1 MSMg01no342_a24.g1 CHROMAT_FILE:
MSMg01no342_a24.g1 PHD_FILE: MSMg01no342_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:29 2005
         (447 letters)



>mm_chr5_132094440_132095286
          Length = 847

 Score =  615 bits (318), Expect = e-180
 Identities = 395/440 (89%), Gaps = 33/440 (7%)
 Strand = Plus / Minus

                                                                       
Query: 9   gaccaggctggccttgaactcagaaacccgcctgcctctgcctcccgagtgctgggatta 68
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 847 gaccaggctggccttgaactcagaaatccgcctgcctctgcctcccgagtgctgggatta 788

                                                                       
Query: 69  aaagtgtgcgccaccacgccc-agcctttttttttttttttttttttacttatttaatgt 127
           |||| ||| |||||||||||| | ||      |||||||||||||| |||||||||||||
Sbjct: 787 aaagcgtgtgccaccacgcccga-cc------ttttttttttttttaacttatttaatgt 735

                                                                       
Query: 128 ttgatccatgcatgtcaaacagtctctgatggaggtcaaaggacaactttcagggcttgg 187
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 734 ttgatccatgcatgtcaaacagtctctgatggaggtcaaagggcaactttcagggcttgg 675

                                                                       
Query: 188 ttctcttcttccatcacattggttctggagaatcaaactcaggtcgccagtcccggtatt 247
           |||||||||||||||||||||||||||| ||||||||||||||||  |||||  ||||  
Sbjct: 674 ttctcttcttccatcacattggttctggggaatcaaactcaggtcatcagtctaggtagc 615

                                                                       
Query: 248 ctttaccctgtgagccatctccccagccatgggttcaacaagcccagcctgttgtcagca 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ctttaccctgtgagccatctccccagccatgggttcaacaagcccagcctgttgtcagca 555

                                                                       
Query: 308 atgctttattttcctccccccaacaccagatgctgttcagttgttacaatatccaggcaa 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atgctttattttcctccccccaacaccagatgctgttcagttgttacaatatccaggcaa 495

                                                                       
Query: 368 gcagagggactgtccctctcttgaaaaggttaagagcctttggtaggattggacttcaag 427
           ||||||||||||||||||                         |||||||||||||||||
Sbjct: 494 gcagagggactgtccctc-------------------------taggattggacttcaag 460

                               
Query: 428 tccagtggtaccaccccagg 447
           ||||||||||||||||||||
Sbjct: 459 tccagtggtaccaccccagg 440


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space:   365769
Effective search space used:   365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)