XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATGA
TTTCTCTTTTGACTTTGAATTCACCCAATTCATATTTTCATTATTTGTAC
ATCAAAGGAAACAGTTGGCAAAGATGTTTATTTATGTAGAAATCAATGAC
TTTAGTTTTCAGTGTGGCATATTTCCTTGAGACGACGATGCTGTATATGT
TTGGAAATAATAGCAGTTAAGTAAATTAAATGAGATTTTCAGACTGTGGT
TGAGATATTGCCTGCAAAGAAAGAAATTTCACGTGGTCAGAAGTTGTCCC
AAGGGTAAGAATGTAGGTGGAGAAAGGTAGTAAAAATGTCGTCATATGCA
TGTCCATTGCTGTCTCGCAGGTCAGTTGTTCCCTGGGGGTCTTTCTAGGT
TCATAAGGAAACAATTTACCATACGGCTGGGATATAGCTCAGTAATAAAA
CACTTGTGAGAATGTAGGAGACGCTGTGGTTAGTCACCAAAACCCACACA
TATACACACACATGTGCCCCCATGCATACACACATAGGAGAAAGAGACAG
AGACAAAAAGAACAAACTAACATTTACACATGGAGTTTATTCTTAAAGCA
AATTGCAAATTACACTCTGTGGGTAAATTATATTTATAAATATATATGTG
TGTGTGTATATATATATTACTGTAGNTCTCTAGCTCCAGCCACGTTTGGG
CGATCATTTACTGTACATAGACTTG

AAATTAAACCCGCGGGCACGTTTCCGAGATTATGAATGTGAAAAAATATA
GATAAGTAGGTTGGGGGTGAGAGCGCTGATTGAGCAAAAAAGATACTGTT
TGCCGTAATACCCTTCAGCTATCCGTGCGCAAAAAAGAACGGCCTTCTAT
CCCTCTATCTTCCCCTTTTGCCCGCCGGTTTTTTTTTCTTATTTATTTTA
TTCCATGTGGTTGCGTTGGCGGCGAAGGAAAACGCCAATCTTTTCCTCGA
GATGTTATACCCATAGATAAGCGGGATCCGCTGTTGCGGTCGGATGTGCT
CTCCCCCTTTTCCCCCTATCTTTTTTTGCCCGCCTTCATTTGTGACCTCG
CTCAGTGTGTGGCGACTATTATACGGTGGTCAGGGTACGGGCTGGGGTCG
GTGTGCGGTGTCCGCCTCGATAGATTACACTCTTTATTATTTTATTTAAC
ACCGCCGTTTTTTATATACCCCGCCCTTTATATTATCTCGCCCGCGCGCC
TTTCGTCCCTCCATCTCCCTTCTTATTTTGTCGATTTATATACCGCTGTT
TTTCTCTTTCAAATTTATTTATCTCTTTCACAATCGCACGCTGTGTCCGC
GAAATTATGGTAGCATTATATGTCCTACACTTATGAACTCTTTACGATCG
TCTATCATCAACACACAACACCCGTTTTATATTTTTTATTTATAATCGCG
CAAGATGAAAAAACGATTTAAACCTCGCGAGGTGCCACGCCCATTTGCTC
GCCCCTTTCCTTTCGCCCCTGTTTTTTTATTTTCTTCCACACCTCCGGGC
GGCGCTCGTTTTCGTTTTATTACTCGATTCCGTAGGTCCGTTCCTCGCTA
TATTA

Query= MSMg01no348_h11.b1 MSMg01no348_h11.b1 CHROMAT_FILE:
MSMg01no348_h11.b1 PHD_FILE: MSMg01no348_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:46 2005
         (520 letters)



>mm_chr5_81771811_81772729
          Length = 919

 Score =  944 bits (488), Expect = 0.0
 Identities = 509/516 (98%), Gaps = 1/516 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatgatttctcttttgactttgaattcacccaattcatattttcattatttgtac 64
           ||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgagatatcttttgactttgaattcacccaattcatattttcattatttgtac 264

                                                                       
Query: 65  atcaaaggaaacagttggcaaagatgtttatttatgtagaaatcaatgactttagttttc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atcaaaggaaacagttggcaaagatgtttatttatgtagaaatcaatgactttagttttc 324

                                                                       
Query: 125 agtgtggcatatttccttgagacgacgatgctgtatatgtttggaaataatagcagttaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtgtggcatatttccttgagacgacgatgctgtatatgtttggaaataatagcagttaa 384

                                                                       
Query: 185 gtaaattaaatgagattttcagactgtggttgagatattgcctgcaaagaaagaaatttc 244
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtaaattaaatgagactttcagactgtggttgagatattgcctgcaaagaaagaaatttc 444

                                                                       
Query: 245 acgtggtcagaagttgtcccaagggtaagaatgtaggtggagaaaggtagtaaaaatgtc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acgtggtcagaagttgtcccaagggtaagaatgtaggtggagaaaggtagtaaaaatgtc 504

                                                                       
Query: 305 gtcatatgcatgtccattgctgtctcgcaggtcagttgttccctgggggtctttctaggt 364
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 505 gtcatatgcatgtccattgctgtctcgcaggtc-gttgttccctgggggtctttctaggt 563

                                                                       
Query: 365 tcataaggaaacaatttaccatacggctgggatatagctcagtaataaaacacttgtgag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tcataaggaaacaatttaccatacggctgggatatagctcagtaataaaacacttgtgag 623

                                                                       
Query: 425 aatgtaggagacgctgtggttagtcaccaaaacccacacatatacacacacatgtgcccc 484
           ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aatgtaggagatgctgtgcttagtcaccaaaacccacacatatacacacacatgtgcccc 683

                                               
Query: 485 catgcatacacacataggagaaagagacagagacaa 520
           ||||||||||||||||||||||||||||||||||||
Sbjct: 684 catgcatacacacataggagaaagagacagagacaa 719


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 919
Length adjustment: 10
Effective length of query: 510
Effective length of database: 909
Effective search space:   463590
Effective search space used:   463590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)