NNNTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCATTATTTTACGTTGATAAGCCTAAATCATGGACTGTTGTT
GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTCCATAGGGTGGCTCCAG
AATCTTACTTTCTCAGGTAGCGCAAAATAGAATCTAAAACCAGTTTTTAG
CATACCTACATGTTAGAATTAACATCAATTTTGCATTATGAACCTGATGT
TATCTCTTAAGTCAAAGTCAAACAAATGATGACAGTTACAGAGTTTTTGA
AAATATTCATTCACTGTGTCGTACCTAGCAGAGGAAACACCATGATCATA
TTGCCAGTTTTGTCTTACTGCCTGCGGATTGATACATTTTTACCTTTTCA
TAGATGATGTTGATATTTCTCAGTGCCTCAAGTTTTTCCATGAAATGCAT
TTAGAAAGCTTCTTTCTCTGCATTTGTTAACTTTGCTTTGTACCCTTCCT
CCTCTACCTCATCTACCACCTCCTCATCCTCCTTCTCTTCCTCCTCTTCT
TCTTGACAAAGTATTATTATGCAGGCCAGGCTGGTTTCATGCTTAGCTAA
ATCTCTAGTTATCTTATGGCTTTCTCCATGGCTATCTTCCCTTCTCCGGG
GGATTTTCTTCATGTTTCTAACATATCTTATTTGGGGTTGTGTTTAAGCA
GCCCACCTTCTTGCTTGTATGACTAAAAGAGCACACCCCAAAACCCAC

NNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCATTTGAAGTCACCTTTTG
ATGAGCATTTACATGGGACACAAGTGTCTTTACATTCTTCACCAATTTGG
AAAGTTTTCATTCAGCAATTTATCAATCATGTCCGCTTCAAGTCCCTGAC
CATCCAGTCAATTGATTGGATACAGTTGTGAATTGGTGAACAAATCCTCA
TATGGCCAAATACCCTTCCAAACCAAGTGTGTGATTATGTGTGCTTCCCC
AAGTTCTAACCAATGTAAAGATTTCCCTTCTTGGTTGTTCCAGAAAGGGA
TTGTAATACTGCAACTGTTCACTTCTGGGTAGTGCCTGTATAACATGTAA
AACTAACAGCCAATCAGACCCTAGTCTTTTCTTCCTGTGTTAACCAATTA
TAGGACACACCCTGTGAGATTATAGGTACATGCTTGGTAGCACATAGCAT
TGTAATAGAAGTACTAACTATGACATTTGGGCAACTTCTTCATGTAGCTT
GGTCATTTCTTCAGGACCCACTCTGCCCAATTACCTATATAACACTTCCA
TTTGATAACGGACTGCTGCTGTAAAGGTCCAAATTTATGAATCGGCGGAT
CAGATAATACCCCGCTCATGATAAAACACCTCCCTTCAATTGCTTTGAAA
TGGCCCCTCTGTGGCGCCTTTGGTCTCCAAATTCATTCCTATCTAAACAT
TTTTCC

Query= MSMg01no353_d14.b1 MSMg01no353_d14.b1 CHROMAT_FILE:
MSMg01no353_d14.b1 PHD_FILE: MSMg01no353_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:01 2005
         (614 letters)



>mm_chr5_19522809_19523822
          Length = 1014

 Score = 1038 bits (537), Expect = 0.0
 Identities = 586/609 (96%), Gaps = 12/609 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   aattccattattttacgttgataagcctaaatcatggactgttgttgtttgtttgtttgt 65
           |||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 218 aattccatcactttatgttgataagcctaaatcatggactgttgttgtttgtttgtttg- 276

                                                                       
Query: 66  ttgtttgtttgtttgttttccatagggtggctccagaatcttactttctcaggtagcgca 125
                   |||   |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 277 --------ttg---gttttccatagggtggctccagaatcttactttctcaggtagagca 325

                                                                       
Query: 126 aaatagaatctaaaaccagtttttagcatacctacatgttagaattaacatcaattttgc 185
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaatagaatttaaaaccagtttttagcatacctacatgttagaattaacatcaattttgc 385

                                                                       
Query: 186 attatgaacctgatgttatctcttaagtcaaagtcaaacaaatgatgacagttacagagt 245
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 attatgaacctgatgtcatctcttaagtcaaagtcaaacaaatgatgacagttacagagt 445

                                                                       
Query: 246 ttttgaaaatattcattcactgtgtcgtacctagcagaggaaacaccatgatcatattgc 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttttgaaaatattcattcactgtgtcgtacctagcagaggaaacaccatgatcatattgc 505

                                                                       
Query: 306 cagttttgtcttactgcctgcggattgatacatttttaccttttcatagatgatgttgat 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cagttttgtcttactgcctgcggattgatacatttttaccttttcatagatgatgttgat 565

                                                                       
Query: 366 atttctcagtgcctcaagtttttccatgaaatgcatttagaaagcttctttctctgcatt 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 atttctcagtgcctcaagtttttccatgaaatgcatttagaaagcttctttctctgcatt 625

                                                                       
Query: 426 tgttaactttgctttgtacccttcctcctctacctcatctaccacctcctcatcctcctt 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgttaactttgctttgtacccttcctcctctacctcatctaccacctcctcatcctcctt 685

                                                                       
Query: 486 ctcttcctcctcttcttcttgacaaagtattattatgcaggccaggctggtttcatgctt 545
           ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||
Sbjct: 686 ctcttcctcctcttcttcttgacaaagtattattatgcaggtcagtctggcttcatgctt 745

                                                                       
Query: 546 agctaaatctctagttatcttatggctttctccatggctatcttcccttctccgggggat 605
           |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 746 agctaaatctctagttatcttatggctttctccatggctatcttcccttctctgggtgat 805

                    
Query: 606 tttcttcat 614
           |||||||||
Sbjct: 806 tttcttcat 814


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space:   606416
Effective search space used:   606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)