CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGCTCTCTTGTAGATCTTTGTCTAGGATTGGGGCCCCATGAAAT
TTCCCACAATACTGGAAACTTAACCAGGGCTTAGGGAGGTTATATGTTTT
GGAAGAGAACTATGGTGGACAACTTATTAAACCAATATAAATTCTAGCCG
CATCAAAAACATCTATCCTTATACGGGAGAGTAATCGAGCGTTATGGGGG
GGGGAGATATCACNNNNAAAATCAAANNNNAACAAAGACGNAGGGGAGAG
GAGGGGGGGGCGGGGGCGGGGGGGGGGGGGTCCNNNNNNTTCCCCCCCCC
CCTCTNNNNAACCAAAAAAATGTTTTGTAAGTCCGAGGGGGGGGGGGGCT
GGNNNNNTTTTTTTTTTCCCNNNNNNNNNNNNTCTTTNAAAAAANNTCTC
CCTCTCTCTTTCAAAAAAAAAAAAAGGGGGGGGGGGGGGGAGAGGGGGGG
GGGGTAAAAAAAAAAAAAAANNATTTTNNNNNNNNNNNNNNNTTNNNNNT
NNNANNATNNNNTTTTNNNNNNNNTNNNNTTTTTTNNTTATATTTTTTTN
NNNNNCCTNNNCNACCTCNNNTTTTCNNTCTNTNTNTTTTTTTTCCCACC
TCTTTTCCCCCCCCTTTCTCCCTCCCCCCCCTCTTCATCACCCCCCCCCC
CTCCCCCCCTTCCCCCTTCCCCCCCCCCCTTTTCTCTCCCCCCCCCCCCC
CCNTTCCCCCCCCTCTCTNCCTCTTTTCCTTTTCCCCACTTCAATCCCTC
TGGGCTG

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGCGCTGATACCAACTTA
TCAGTGAGTGCATATCATGTGTGTTCTTTTGTTATTAGGTTATCCCATTC
AGGATATTTTCTAGTTCCATCCATTTTCATACAAATGGAATTAGATATTT
TTTATTTAGTTTAAATGGATACTGCTTAGACATGATCATAGTTTCTGAAG
AAAGTCTGCATTCTAATCTGAGTGTGTGTTTACTATGTGATTTGAGAAAC
ATTATTGATTTTCTTTGGCCTTAATTCCCATGTATCTAAAACTAACATAG
TAATGAGATACTGTACATTGTTGCTATAGCAAATGAATATGAAATTATTC
ATGTAATGATTGTTAATTGTGTAGTCATTATTGACTGTTTACAAGATGGC
AAACTGTACTTAATTAGTATAAATAATAAATCACATCTCTGATAAACTCA
GGGATAATCATTCAATATGTTTACATTTATTAATAATAAATTTGAACTAA
TTTGAGCTGGCTGATGTTGAAGAATGTGATTAAAATATCAAATAGGAGAT
TTTTAAGAACTAGTTCACATAATTATTATCTTATTCCAAGCAATATTCTT
TGTACGAAGAATTTGTTCCCTGAAAATCTAAATCATTTTCTTCCTTTACG
GGGGCGTGGGCTCATCTGGACCGATATCATCATTTTCTCCTTCCCTCTTT
CTTCTTTCCCT

Query= MSMg01no355_o16.g1 MSMg01no355_o16.g1 CHROMAT_FILE:
MSMg01no355_o16.g1 PHD_FILE: MSMg01no355_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:29 2005
         (507 letters)



>mm_chr5_61864680_61865586
          Length = 907

 Score =  919 bits (475), Expect = 0.0
 Identities = 499/507 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgcgctgataccaacttatcagtgagtgcatatcatgtgtgttcttttgttattaggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgcgctgataccaacttatcagtgagtgcatatcatgtgtgttcttttgttattaggt 260

                                                                       
Query: 61  tatcccattcaggatattttctagttccatccattttcatacaaatggaattagatattt 120
           ||| ||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 261 tatgccattcaggatattttctagttccaaccattttcatagaagtggaattagatattt 320

                                                                       
Query: 121 tttatttagtttaaatggatactgcttagacatgatcatagtttctgaagaaagtctgca 180
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 tttatttagtttaaatggatactgcttaggcatgatcatagtttctgaagaaagtctgca 380

                                                                       
Query: 181 ttctaatctgagtgtgtgtttactatgtgatttgagaaacattattgattttctttggcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctaatctgagtgtgtgtttactatgtgatttgagaaacattattgattttctttggcc 440

                                                                       
Query: 241 ttaattcccatgtatctaaaactaacatagtaatgagatactgtacattgttgctatagc 300
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 ttaattcccatgtatctaaaactaacatagtaataagatactgtacattgttgctatagc 500

                                                                       
Query: 301 aaatgaatatgaaattattcatgtaatgattgttaattgtgtagtcattattgactgttt 360
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 aaatgaatatgaaattattcatgtaatgattgttaattttgtagtcattattgactgttt 560

                                                                       
Query: 361 acaagatggcaaactgtacttaattagtataaataataaatcacatctctgataaactca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaagatggcaaactgtacttaattagtataaataataaatcacatctctgataaactca 620

                                                                       
Query: 421 gggataatcattcaatatgtttacatttattaataataaatttgaactaatttgagctgg 480
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gggataatcatttaatatgtttacatttattaataataaatttgaactaatttgagctgg 680

                                      
Query: 481 ctgatgttgaagaatgtgattaaaata 507
           |||||||||||||||||||||||||||
Sbjct: 681 ctgatgttgaagaatgtgattaaaata 707


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space:   445809
Effective search space used:   445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)