Query= MSMg01no356_i20.b1 MSMg01no356_i20.b1 CHROMAT_FILE:
MSMg01no356_i20.b1 PHD_FILE: MSMg01no356_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:18 2005
(476 letters)
>mm_chr5_93537378_93538252
Length = 875
Score = 806 bits (417), Expect = 0.0
Identities = 449/469 (95%), Gaps = 16/469 (3%)
Strand = Plus / Plus
Query: 8 ttcaaggttactctcagctatgttacaagttcgaggccagcctgagctacaaccttatct 67
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 223 ttcaaggttaccctcagctatgttacaagttcgaggtcagcctgagctacaaccttatct 282
Query: 68 taacaacaacgatgacaacaacaacaagaagcaacaacagcaagaaaagcaagtaggaag 127
|||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 283 taacaacaac---------------aagaagcaacaacagcaagaaaagcaagtaggaag 327
Query: 128 ttatttttcacattctaaaatcaagagggtagatggggaaaattggaagttgagctggac 187
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttatttt-cacattctaaaatcaagagggtagatggggaaaattggaagttgagctggac 386
Query: 188 tctgccttcattcctttctcagattggaactggagccattttcaggttttcttttgcctt 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tctgccttcattcctttctcagattggaactggagccattttcaggttttcttttgcctt 446
Query: 248 cgcatgtgtttgagaatgtttatgttcccttgtgtgtgggctgtgctgctaggctcattg 307
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 447 cgcatgtgtttgagaatgtttatgttcccttgtgtgtgggccgtgctgctaggctcattg 506
Query: 308 taaccatcacaacaatttcctaatggatgttgtgtaactctgcatatttttcctctggct 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 taaccatcacaacaatttcctaatggatgttgtgtaactctgcatatttttcctctggct 566
Query: 368 agagttcataggtaaacgtttaccttcacaacagcttcatgagtgggtttcttagctgtt 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 agagttcataggtaaacgtttaccttcacaacagcttcatgagtgggtttcttagctgtt 626
Query: 428 gttctcaactcagtgcctacagcggctatgtgatgcatcaggattgaga 476
||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 627 gttctcaactcagtgcctacagctgctatgtgatgcatcaggattgaga 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 875
Length adjustment: 10
Effective length of query: 466
Effective length of database: 865
Effective search space: 403090
Effective search space used: 403090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_i20.g1 MSMg01no356_i20.g1 CHROMAT_FILE:
MSMg01no356_i20.g1 PHD_FILE: MSMg01no356_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:19 2005
(376 letters)
>mm_chr5_93725285_93726061
Length = 777
Score = 671 bits (347), Expect = 0.0
Identities = 367/375 (97%), Gaps = 5/375 (1%)
Strand = Plus / Minus
Query: 1 ttcctcttggcagaccaaatggcactgcaatttctgttatcagaaaagaaaatgaaaatg 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 573 ttcctcttggcagaccgaatggcactgcaatttctgttatcagaaaagaaaaagaaaatg 514
Query: 61 aaagggaaaattaaaaagaaaaaaatcccaacggttaaaccagagggttgaaggtcagct 120
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aaagggaaaattaaaa--aaaaaaatcccaacggttaaaccagagggttgaaggtcagct 456
Query: 121 ctacagagagtgctgtgtgagcagtggtttag-aacaagcctggaactataccagactcc 179
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 455 ctacagagagtgctgtgtgagcagtggtttagaaacaagcctggaactataccagactcc 396
Query: 180 --agtgactgccaggagtgattgcacttgcctctgcggaccaagggccagtgagaacttt 237
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cgagtgcctgccaggagtgattgcacttgcctctgcggaccaagggccagtgagaacttt 336
Query: 238 atacctaacatcacatcacagctccacagaaatgagagaagcccactcccatctcggcta 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 atacctaacatcacatcacagctccacagaaatgagagaagcccactcccatctcggcta 276
Query: 298 tcccaggattttccagttcgttttctagataggaagcttaaagaccagagaggccagctc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tcccaggattttccagttcgttttctagataggaagcttaaagaccagagaggccagctc 216
Query: 358 agaacaacatattag 372
|||||||||||||||
Sbjct: 215 agaacaacatattag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 777
Length adjustment: 9
Effective length of query: 367
Effective length of database: 768
Effective search space: 281856
Effective search space used: 281856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
