Query= MSMg01no357_j13.b1 MSMg01no357_j13.b1 CHROMAT_FILE:
MSMg01no357_j13.b1 PHD_FILE: MSMg01no357_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:38 2005
(508 letters)
>mm_chr5_93428847_93429754
Length = 908
Score = 714 bits (369), Expect = 0.0
Identities = 393/401 (98%)
Strand = Plus / Minus
Query: 108 gggttgtgtccactttgggggtagacggactctttcgcagtggttgcatattccacgtat 167
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 908 gggttgtgtccactttgggggtagacggactctttcgcagtagttgcatattccacgtat 849
Query: 168 tggatatttacaatccaattcacaacagtagcaaaattacagttatgaagtagcaaataa 227
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 tggatatttataatccaattcacaacagtagcaaaattacagttatgaagtagcaaataa 789
Query: 228 aataattttgtgatcagggatcgcctcattttgaggaactgtactaagggtcccagcatt 287
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 788 aataattttgtgatcagggatcacctcaacatgaggaactgtactaagggtcccagcatt 729
Query: 288 aaaagggataagaaccattgttgtggagagttataaaatacaccccagccttcctgtggc 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 aaaagggataagaaccattgttgtggagagttataaaatacaccccagccttcctgtggc 669
Query: 348 tcggatggccgcttggttttgaagctttgacttgccttcagaaggcttgtcacagaagaa 407
| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 668 tgggatggccgcttggttttgaagctttgacttaccttcagaaggcttgtcacagaagaa 609
Query: 408 atacatcattgatttgctctgtttttagatggcttggttcgctcccattctaaatctact 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 atacatcattgatttgctctgtttttagatggcttggttcgctcccattctaaatctact 549
Query: 468 ctctccgctgctgcatttttaagacgttacttggcagggtc 508
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ctctccgctgctgcatttttaagacgttacttggcagggtc 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_j13.g1 MSMg01no357_j13.g1 CHROMAT_FILE:
MSMg01no357_j13.g1 PHD_FILE: MSMg01no357_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:38 2005
(502 letters)
>mm_chr5_93268768_93269669
Length = 902
Score = 932 bits (482), Expect = 0.0
Identities = 496/502 (98%), Gaps = 3/502 (0%)
Strand = Plus / Plus
Query: 1 ttatcctaagatttgatattggcagtggcccatttacagctaatccttcccatggatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatcctaagatttgatattggcagtggcccatttacagctaatccttcccatggatatt 260
Query: 61 tcctgtcaatacagatggcttctttcatagtctcagcaaaattaacaactagtaacttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctgtcaatacagatggcttctttcatagtctcagcaaaattaacaactagtaacttaa 320
Query: 121 aatttattattttttaaaattttctgtgtatgagtgttctgcctgcatgtatatatgcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatttattattttttaaaattttctgtgtatgagtgttctgcctgcatgtatatatgcgc 380
Query: 181 accttgttcatgcttggggctcatggaggacaggagaggtctttgggtcccctaaaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accttgttcatgcttggggctcatggaggacaggagaggtctttgggtcccctaaaactt 440
Query: 241 tagttacagacaattgggtgctgagaattaaacttggatcctctggaatagaagcaagtg 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taattacagacaattgggtgctgagaattaaacttggatcctctggaatagaagcaagtg 500
Query: 301 tttgtgatcactgagccatttctccagccctgccactagtaacatgaacattaaaatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttgtgatcactgagccatttctccagccctgccactagtaacatgaacattaaaatgat 560
Query: 361 agttaatgtctcctctgttgtctgaattaatttttatcaggttatctaataatattgctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agttaatgtctcctctgttgtctgaattaatttttatcaggttatctaataatattgctt 620
Query: 421 ataataagttcccctcctcttcctcctcctcctcttcctcctcctcctcttcctcctcct 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 ataataagttcccctcctcttcctcctcctcctcttcctcctcctc---ttcctcctcct 677
Query: 481 cctctttctcctcctcctagta 502
|||||| | |||||||||||||
Sbjct: 678 cctcttccacctcctcctagta 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
