Query= MSMg01no357_p18.b1 MSMg01no357_p18.b1 CHROMAT_FILE:
MSMg01no357_p18.b1 PHD_FILE: MSMg01no357_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:08 2005
(421 letters)
>mm_chr5_135734383_135735208
Length = 826
Score = 706 bits (365), Expect = 0.0
Identities = 402/417 (96%), Gaps = 5/417 (1%)
Strand = Plus / Minus
Query: 10 cagtctctgactttccaacttagatcaacccctagcaccataactgcccagactagattg 69
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cagtctctgaatttacaacttagatcaacccctagcaccataactgcccagactagattg 567
Query: 70 gaaagatggggcttgggacagtggagctggtccatctgaggggtgacttcctgcagctgg 129
||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 566 gaaagatggggctcgggacagtggagttcgtccatctgaggggtgacttcctgcagctgg 507
Query: 130 ccaggcaagctggagagagctttataaagccaagaagcccagccagaccctggcaaatgt 189
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 506 ccaggcaagctggagagagctttataaagccaagaaccccagccagaccctggcaaatgt 447
Query: 190 ccctgggacaagatgaggcctggcaaaggctgggtgcccctcccacctggttgacccccc 249
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccccgggacaagatgaggcctggcaaaggctgggtgcccctcccacctggttgacccccc 387
Query: 250 cc-----gggggggctgctatttgccaccccagaggagggttggtgtcttgcagggagag 304
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 386 cccgggggggggggctgctatttgccaccccagaggagagttggtgtcttgcagggagag 327
Query: 305 actgctaatggactacagacctagaggactcccctcagccctcagggcctgtgggcaatc 364
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 actgctaatggactataggcctagaggactcccctcagccctcagggcctgtgggcaatc 267
Query: 365 cctggggcctccgggcagcttgaggctcctctgccaggctttttgaggcccctccgg 421
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cctggggcctccgggcagcttgaggctcctctgccaggctttttgaggcccctccgg 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 826
Length adjustment: 9
Effective length of query: 412
Effective length of database: 817
Effective search space: 336604
Effective search space used: 336604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_p18.g1 MSMg01no357_p18.g1 CHROMAT_FILE:
MSMg01no357_p18.g1 PHD_FILE: MSMg01no357_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:08 2005
(475 letters)
>mm_chr5_135584338_135585211
Length = 874
Score = 818 bits (423), Expect = 0.0
Identities = 458/475 (96%), Gaps = 11/475 (2%)
Strand = Plus / Plus
Query: 1 tgctctggccttccaagtgctggaactacaggcacgagccacaagaagccttgggtcccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgctctggccttccaagtgctggaactacaggcacgagccacaagaagccttgggtcccc 260
Query: 61 atgttcccccaaagggtctcccgtttcccgaccactcccaactcaggcttcctgcttcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgttcccccaaagggtctcccgtttcccgaccactcccaactcaggcttcctgcttcgg 320
Query: 121 ccatacattccacttgggcaggtttagagggctttccagctcagaccttgggcagacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatacattccacttgggcaggtttagagggctttccagctcagaccttgggcagacaga 380
Query: 181 agggaagcggttttagagaaagagcacgtggagggtccaagggcactccctaaactgcag 240
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 agggaagcggttttagagaaagagcacgtggagggtctgagggcactccctaaactgcag 440
Query: 241 ctccctagggtggagagtgccgtgtcccccacccgccaaagagccagactattaaattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctccctagggtggagagtgccgtgtcccccacccgccaaagagccagactattaaattct 500
Query: 301 cttgagtgggattctgaggatacccaagtgtagccaagtacacaggagtctttggtgaag 360
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 501 cttgagtgggattctgaggatacccaagt-tagccaagtacacaggagtttttggtgaag 559
Query: 361 gaaaaaaaaaaaaaaaacaaaaaaccataaaacaaaacgtgggccgggagaggctctgct 420
||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 560 --aaaaaaaaaaaaaaaca--------taaaacaaaacgtgggccaggagaggctctgcc 609
Query: 421 aggaagggtgcttggtcccggactggtgacctgagtctgattcccagtacccaca 475
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 agggagggtgcttggtcccggactggtgacctgagtctgattcccagtacccaca 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 874
Length adjustment: 10
Effective length of query: 465
Effective length of database: 864
Effective search space: 401760
Effective search space used: 401760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
