Query= MSMg01no359_b05.b1 MSMg01no359_b05.b1 CHROMAT_FILE:
MSMg01no359_b05.b1 PHD_FILE: MSMg01no359_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:30 2005
(449 letters)
>mm_chr5_49006842_49007690
Length = 849
Score = 797 bits (412), Expect = 0.0
Identities = 442/462 (95%), Gaps = 17/462 (3%)
Strand = Plus / Plus
Query: 5 gaattcagcaagttacatgaaatgccatgtaataatttgttcttgactatttaaaattaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcaagttacatgaaatgccatgtaataatttgttcttgactatttaaaattaa 264
Query: 65 atgctttcggctttttctggggagactatttccacctcctccaactttctcaggatgact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgctttcggctttttctggggagactatttccacctcctccaactttctcaggatgact 324
Query: 125 tccccaggtaggaaaacctgttgtagagactcaggagaacctgttgctaccatgtaaacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tccccaggtaggaaaacctgttgtagagactcaggagaacctgttgctaccatgtaaacc 384
Query: 185 g----------------tgaacatttgctcctttcccaacatcccactgtgatgcttagg 228
| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgaacatttgcaaccatgaacatttgctcctttcccaacatcccactgtgatgcttagg 444
Query: 229 tcaaagctaccaccccatcttcctggctgatcgtttgcatctgaacaatcagcttttgcg 288
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcaaagctaccaccccatcttcctggctgatcgtttgcatctgaacaatcagcttttgca 504
Query: 289 cttgctttgctacaatctattatgtgaaaagaaaggtcagagcaaatcctttaaaaaatg 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttgctttgctacaatctattatgtgaaaagaaaggtcagagcaaatcctttaaaaaatg 564
Query: 349 taatcaaagcataaactgcgcgtgctttaaagtctccaataggtcttaatgtttaagaaa 408
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taatcaaagcataaactgcttgtgctttaaagtctccaataggtcttaatgtttaagaaa 624
Query: 409 tggtttattttgctctgttttgacattttttt-ctcctattg 449
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 625 tggtttattttgctctgttttgacattttttttctcctattg 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_b05.g1 MSMg01no359_b05.g1 CHROMAT_FILE:
MSMg01no359_b05.g1 PHD_FILE: MSMg01no359_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:30 2005
(344 letters)
>mm_chr5_49181495_49182238
Length = 744
Score = 596 bits (308), Expect = e-175
Identities = 335/344 (97%)
Strand = Plus / Minus
Query: 1 ctcttattttcatcgttaaatactatgatgttttaaaaagaattctatgcatccagaatc 60
||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 544 ctcttattttcattattaaatactatgatattttaaaaagaattctatgcatccaaaatc 485
Query: 61 aagcatttgactagagaaatgaacaaaatcaagagactatgaaaatgagtgttgaaaact 120
||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 484 aagcatttgactagagacatgaacaaaatcaagagactataaaaatgagtattgaaaact 425
Query: 121 taaagaaactaaaggaacttggattgtccaggcagcagctctccgtgactctgtgtctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 taaagaaactaaaggaacttggattgtccaggcagcagctctccgtgactctgtgtctct 365
Query: 181 acaggagtgatagttctagctactaaccaggtatagttaggaaactcatacaccatgccc 240
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 actggagtgattgttctagctactaaccaggtatagttaggaaactcatacaccatgccc 305
Query: 241 ctcttaaatagcatgagaattcagcaaacagaagagtcaagcaactacttaaacaggagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctcttaaatagcatgagaattcagcaaacagaagagtcaagcaactacttaaacaggagg 245
Query: 301 catggcattattaacaaggttcagtatcgtggctgctctcagct 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 catggcattattaacaaggttcagtatcgtggctgctctcagct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
