Query= MSMg01no363_n21.b1 MSMg01no363_n21.b1 CHROMAT_FILE:
MSMg01no363_n21.b1 PHD_FILE: MSMg01no363_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:43 2005
(626 letters)
>mm_chr5_97667623_97668649
Length = 1027
Score = 1151 bits (595), Expect = 0.0
Identities = 613/619 (99%), Gaps = 1/619 (0%)
Strand = Plus / Plus
Query: 9 gaattcttaaggaagatag-taacactgcttgtggagggagattgcccctgtgggcaagc 67
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattcttaaggaagaaagctaacactgcttgtggagggagattgcccctgtgggcaagc 268
Query: 68 tgagaaacgcacagatctctggatctcttctaccatcaagaagcatggaggttgttctgg 127
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 269 tgagaaacacacagatctctggatctcttctaccatcaagaagcatggaggttgtcctgg 328
Query: 128 cccatcagcaaacacttggaaaggtcatgaggtccagacgcagagacttccattatgaca 187
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 329 cccatcagcaaacacttggaaaggtcatgaggtccagactcagagacttccattatgaca 388
Query: 188 catctaagcctttaaaactatcacaaaagcaaaaagaatttccctaaaggaaggactgat 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 catctaagcctttaaaactatcacaaaagcaaaaagaatttccctaaaggaaggactgat 448
Query: 248 tatctccctagacacggagagggcagaattatgatttgggaaacaaaaatgaatgggagg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tatctccctagacacggagagggcagaattatgatttgggaaacaaaaatgaatgggagg 508
Query: 308 tctcatccaagtgttactcctctcgaaaagcaaagaaacagagatgtctttctggatcaa 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tctcatccaagtgttactcctctcgaaaagcaaagaaacagagatgtctttctggatcaa 568
Query: 368 cttgcagagttgggtagaagtggccacacagcggttgggctctccttgagccctcattca 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 cttgcagagttgggtagaagtggccacacagcggttgggctctccttgagccctcattca 628
Query: 428 gctttcaccaaagcattgctatttctaagcaaccggagtccttccttaagctgcagcaca 487
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gctttcaccaaagcgttgctatttctaagcaaccggagtccttccttaagctgcagcaca 688
Query: 488 gtgggaagtgtaatgcaaatattttcagatgagtcacctccttttataagtggattctta 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gtgggaagtgtaatgcaaatattttcagatgagtcacctccttttataagtggattctta 748
Query: 548 atattttgactttctaggggatgtgtggcaaagcaaggggtgtttctcagatacagagaa 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 atattttgactttctaggggatgtgtggcaaagcaaggggtgtttctcagatacagagaa 808
Query: 608 taggggagtatgcacaggc 626
|||||||||||||||||||
Sbjct: 809 taggggagtatgcacaggc 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1027
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1017
Effective search space: 626472
Effective search space used: 626472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_n21.g1 MSMg01no363_n21.g1 CHROMAT_FILE:
MSMg01no363_n21.g1 PHD_FILE: MSMg01no363_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:43 2005
(470 letters)
>mm_chr5_97840198_97841067
Length = 870
Score = 886 bits (458), Expect = 0.0
Identities = 467/470 (99%)
Strand = Plus / Minus
Query: 1 agtgtcaaaggctttagtcttttaatctgggcaaactcacaggattggtttataatattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 agtgtcaaaggctttagtcttttaatctgggcaaactcacaggattggtttataatattg 611
Query: 61 cccttgaaatatctcgatttactaatgggagaaaaagatttctataaaagaataatacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cccttgaaatatctcgatttactaatgggagaaaaagatttctataaaagaataatacaa 551
Query: 121 ctgtttgtgaagttttaaatgtagtttatgtgctttaagaagaaaattaactggcctatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ctgtttgtgaagttttaaatgtagtttatgtgctttaagaagaaaattaactggcctatt 491
Query: 181 tttaaaataagtagcactctttttaaaaaattaaataaagtcctaagaccaatcagtgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tttaaaataagtagcactctttttaaaaaattaaataaagtcctaagaccaatcagtgta 431
Query: 241 tatcatttaagtgtgaaagaagttagcttttgtcataatgttgaccttcagcattcttca 300
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 430 tatcatttaagtgtgaaagaagttagcttttgtcataatattgaccttcagcgttcttca 371
Query: 301 atgtaaaatctccacttaggtcttggtagtcatagtaatacggacatctcttggaggtat 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 370 atgtaaaatctccacttaggtcttggtagtcataataatacggacatctcttggaggtat 311
Query: 361 ttgtgagccttacttcacgtgactgatgtgtgatttcagcaaaggcaacctaacagggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttgtgagccttacttcacgtgactgatgtgtgatttcagcaaaggcaacctaacagggaa 251
Query: 421 ttgattctacattgtaacgtctacttcatcagcgtccttcagcagccaac 470
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttgattctacattgtaacgtctacttcatcagcgtccttcagcagccaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
