Query= MSMg01no364_h02.b1 MSMg01no364_h02.b1 CHROMAT_FILE:
MSMg01no364_h02.b1 PHD_FILE: MSMg01no364_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:33 2005
(442 letters)
>mm_chr5_90466117_90466960
Length = 844
Score = 743 bits (384), Expect = 0.0
Identities = 427/442 (96%), Gaps = 6/442 (1%)
Strand = Plus / Plus
Query: 5 gaattctacaccatc-atttctatttctctgccagtatctcctaccctagcccacagaaa 63
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctacacca-caatttctatttctctgccagtatctcctaccctagcccacagaaa 263
Query: 64 tagttcttcccatgaaacattctgcctccctaaagtttattcagatcaggcagaataatc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagttcttcccatgaaacattctgcctccctaaagtttattcagatcaggcagaataatc 323
Query: 124 ttgcattaactgactcgggtcacatatgccccatgattaaaacactttcacgtctctcca 183
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 324 ttgcattaactgactcgggttacatatgccccatgattaaaaccctttcacgtctctcca 383
Query: 184 ctgcatgcagattatttcttgtaacgtagccttatttcttgccaactcttttctcactgg 243
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 384 ctggatgcagattatttcttgtaacttagccttatttcttgccaactcttttctcactgg 443
Query: 244 tctttatggttgtctttttttttt--aatctttaaaagacccaacttaaatgtttgtaaa 301
|||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 444 tctttaccgttgtcttttttttttttaatctttaaaggacccaacttaaatgtttgtaaa 503
Query: 302 aa-tgcattaaaagttcaaacaataagtttgtctgcccttttgctttgtcctcttgactt 360
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaatgcattaaaagttcaaataataagtttgtctgcccttttgctttgtcctcttgactt 563
Query: 361 ctgatgctcttctgacatcattgaatatctaaccgtttctattcgatttttttttctctc 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 564 ctgatgctcttctgacatcattgaatatctaaccatttctattcgattttttttt-tctc 622
Query: 421 tgctcacataatgcttccttgg 442
||||||||||||||||||||||
Sbjct: 623 tgctcacataatgcttccttgg 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 844
Length adjustment: 10
Effective length of query: 432
Effective length of database: 834
Effective search space: 360288
Effective search space used: 360288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_h02.g1 MSMg01no364_h02.g1 CHROMAT_FILE:
MSMg01no364_h02.g1 PHD_FILE: MSMg01no364_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:33 2005
(107 letters)
>mm_chr5_90638143_90638649
Length = 507
Score = 199 bits (103), Expect = 3e-56
Identities = 106/107 (99%)
Strand = Plus / Minus
Query: 1 attccaaaaggaaaggaattagaaacattagaacttccataattaaattgctcttactgc 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 attccaaaagggaaggaattagaaacattagaacttccataattaaattgctcttactgc 248
Query: 61 attatttttgagcatttttgttgtgggattaatagttatatgagttg 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 attatttttgagcatttttgttgtgggattaatagttatatgagttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 107
Length of database: 507
Length adjustment: 8
Effective length of query: 99
Effective length of database: 499
Effective search space: 49401
Effective search space used: 49401
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
