NGCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTTAGCTCTGAGCCACATTTTTAATGGGGTTATCTGATT
TTCTGGAGTCCACCTTCTTAATATATATATATATAATATATATTATATAT
ATATTAGATATTAGTCCCCTATCTGATTTAGGATAGATAAAGATCCTTTC
CCAGTCTGTTGGTGGACTTTTTGTCTTATTGATGGTGTCCTTTGCCTTAC
AGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCAATTCTTGATCTTACA
GCACAAGCCATTGCTGTTCTATTCTTAAATTTTTCCCCTGTGCCCATATC
TTCCAGGTTTTTCCCCACTTTCTCCTCTATAAGTTTCACTGTCTCTGGTT
TTATGTGGAGTTCCTTGACCCACTTACACTTGACCTTAATACAAGGAGAT
AGGAATGGATCTATTCGCATTCTTCTACATGTTAACTGCCAGTTGCACTA
GTGCCATTTGTCGGATATGCTGTCCTTTTTCCTCTGGATGGTTCTAGCTC
CCTTGGCCTAGACACTGTGACCGTAGGTGTGTTGTCTTCTTTCTGCCGCT
TTCCCTCTCTTTTTTTTTCGTTCTCGTGCCCCCCTACCTTTGTTGTTATT
TGTCTTCTTCTTAGTCCTTTCACTTTTTGTGGTGTCGTTTTTCTCTTGTT
TTGTCCCCCTTTGAGTTGTTGCTTCTCTTTCGTATGGTCACTGGCCTCGT
GACCGTTCCCGCTGTTTGTGTCGTTCGTCTN

NNNGGCGATGATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTAATTACATCTGGTGTATG
GTTTAATTCTGTCCATGTTAATAATGCATATTGCATTACACCTACAGCAG
ATACTTTGTAGGATATACACCCAAAGGGAATTATTAAGCTGGAAGGTAGG
GTTGAAGTGTTTACATTTTTTAAAGGTACATATCTATTATGTTTTATTCT
TTGTGAAAAACAAATCAAAACAATAAAACAACAATAACAACAACAACAAA
ACAAAACCAACTAACCACTAAAACAAGCAACTTAATTTTGCTAGATTTTT
TAACATTAATGTGAAATTCTTGACATTTAGTTTGCTTTCTTTCTTGAAAT
TATTATTACTTAAACCACTATATCTGTTTATAAGTTGGCATAAATATCAG
CATAATAAAAGGAGTATTTACCCTCAAACCACACATTGAACAGAAAGGCC
ACAACATAATCCCCATGGTAGATCTGTCATAGACAAATCCATAGGCAGGA
TGTATTAGCACATCAGCTGGACAGTTGCCACTGGGGACCAGAGTGAGGGA
ATGTGTCCCTGGCCCAGTTGACATGAGAGTACGGTTTATGCGCAGTACAC
CTTTCTGGTGGGCATATTTACTCAGTTTAAGGGGGGTTTTGAAAAAGGCC
CCTATCCGTGCCGGTTGAACTTTGGGGAGTGTGTGTTTTCTTGCTGTAGG
GTGTGTCTGGATGT

Query= MSMg01no364_p12.g1 MSMg01no364_p12.g1 CHROMAT_FILE:
MSMg01no364_p12.g1 PHD_FILE: MSMg01no364_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:19 2005
         (452 letters)



>mm_chr5_81140089_81140940
          Length = 852

 Score =  725 bits (375), Expect = 0.0
 Identities = 430/461 (93%), Gaps = 21/461 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctaattacatctggtgtatggtttaattctgtccatgttaataatgcatattgcattaca 60
           |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ctaattgcatctggtgtatgatttaattctgtccatgttaataatgcatattgcattaca 401

                                                                       
Query: 61  cct---------acagcagatactttgtaggatatacacccaaagggaattattaagctg 111
           |||         ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cctacagcatacacagcagatactttgtaggatatacacccaaagggaattattaagctg 341

                                                                       
Query: 112 gaaggtagggttgaagtgtttacattttttaaaggtacatatctattatgttttattctt 171
           | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gtaggtggggttgaaatgtttacattttttaaaggtacatatctattatgttttattctt 281

                                                                       
Query: 172 tgtgaaaaacaaatcaaaacaataaaacaacaataacaacaacaacaaaacaaaaccaac 231
            ||||||||||||||||||||||||            |||||||||||||||||||||||
Sbjct: 280 cgtgaaaaacaaatcaaaacaataa------------aacaacaacaaaacaaaaccaac 233

                                                                       
Query: 232 taaccactaaaacaagcaacttaattttgctagattttttaacattaatgtgaaattctt 291
           |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 taaccaataaaacatgcaacttaattttgctagattttttaacattaatgtgaaattctt 173

                                                                       
Query: 292 gacatttagtttgctttctttcttgaaattattattacttaaaccactatatctgtttat 351
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 172 gacatttagtttgctttctttcttgaaattattattacttaaactactatatctgtttat 113

                                                                       
Query: 352 aagttggcataaatatcagcataataaaaggagtatttaccctcaaaccacacattgaac 411
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 112 aagttggcataaatatcagcataataaaaggagtgtttaccctcaaaccacacattgaac 53

                                                    
Query: 412 agaaaggccacaacataatccccatggtagatctgtcatag 452
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 52  agaaaggccacaacataatccccatggtagatctgtcatag 12


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space:   372164
Effective search space used:   372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)