Query= MSMg01no367_c05.b1 MSMg01no367_c05.b1 CHROMAT_FILE:
MSMg01no367_c05.b1 PHD_FILE: MSMg01no367_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:12 2005
(599 letters)
>mm_chr5_32733711_32734709
Length = 999
Score = 588 bits (304), Expect = e-172
Identities = 342/356 (96%), Gaps = 4/356 (1%)
Strand = Plus / Minus
Query: 11 gaattcactttctattaagctcccctatttaattacagaagtaaaaattaggtagacaaa 70
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gaattcactttcaattaagctcccctatttaattacagaagtaaaaattaggtagacaaa 298
Query: 71 ggactttcacttgagtatttcagaaatattttacttttcaagtctggactatcatgggta 130
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 297 ggactttcacttgagtatttcagaaatattttacttttgaagtctggattatcatgggta 238
Query: 131 aataaaaacagactcttgtttgaagttgaaacttagaatactcaagatacaatttgcaaa 190
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 237 aataaaaacagactcttgtttgaagttgaaacttagaatacacaagatacaatttgcaaa 178
Query: 191 acacatgaaactcaagaagaacgaagaccaaagtgtggacacttggccccttcttagaat 250
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 177 acacatgaaactcaagaagaacaaagaccaaagtgtggacacttcgccccttcttagaat 118
Query: 251 tgggaacaaaacacccatggaaggagttacagagacaaagtttggagctgagacgaaagg 310
||| || ||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 117 tggaaataaaacacccatggaaggagtt---gagacaa-gtttggagctgagacgaaagg 62
Query: 311 atggaccatccagagactgccccacccgggggtccatcccataatcagccacaaaa 366
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 61 atggaccatccagagactgccccacctggggatccatcccataatcagccacaaaa 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_c05.g1 MSMg01no367_c05.g1 CHROMAT_FILE:
MSMg01no367_c05.g1 PHD_FILE: MSMg01no367_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:12 2005
(549 letters)
>mm_chr5_32559062_32560010
Length = 949
Score = 1019 bits (527), Expect = 0.0
Identities = 543/549 (98%), Gaps = 2/549 (0%)
Strand = Plus / Plus
Query: 1 tgacatggaagccccagtcgggtgtgacttggagttttctgactcagcacgcacagctga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgacatggaagccccagtcgggtgtgacttggagttttctgactcagcacgcacagctgg 260
Query: 61 tcacagagaatacctgctcacaggccaccacaacattctataagtcatgtgtatgaatga 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 tcacagagaatacctgctcacaggccaccacaacattctataagtcgtgtgtatgaatga 320
Query: 121 gactcgccaatcatgccctcagagcaaagcatcactcagaagatttgcttagagactgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gactcgccaatcatgccctcagagcaaagcatcactcagaagatttgcttagagactgca 380
Query: 181 gtacaactcgggcctgcacatccatcgattgtctggtctctgagtctataaacaatgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtacaactcgggcctgcacatccatcgattgtctggtctctgagtctataaacaatgagg 440
Query: 241 ttctcaaactgtgagtggagtatcagaaaaaaaaaattatgattgggggtctccacaaca 300
||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 ttctcaaaccgtgggtggagtatcagaaaaaaaa--ttatgattgggggtctccacaaca 498
Query: 301 tgaggaactgtattaaagggtcacagcattttgaaggtctagaggattgtaaatcctgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgaggaactgtattaaagggtcacagcattttgaaggtctagaggattgtaaatcctgcc 558
Query: 361 tctagagttgccgtgaggatattaccctttacaaagaacacaagaatttaatgcacccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tctagagttgccgtgaggatattaccctttacaaagaacacaagaatttaatgcacccca 618
Query: 421 cagcatgacctcagttccacctctgttgctcttgaccttcctccttgcagtccagggccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 cagcatgacctcagttccacctctgttgctcttgaccttcctccttgcagtccagggccc 678
Query: 481 tgcctcccttccatccaggaaggtgatctttgctcaacgcacatctcttgcccacacagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tgcctcccttccatccaggaaggtgatctttgctcaacgcacatctcttgcccacacagc 738
Query: 541 attttcctg 549
|||||||||
Sbjct: 739 attttcctg 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
