NNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAA
AAATGTTCAACATCCTTAATTATCAGGGAAATGCAAATCAAAACAACCCT
GAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTG
ACAGCAGATGCTGGCATGGATGTGGAGAAAGAGGAACACTCCATTATTGG
TGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTAGTGGTTCCT
CAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGG
GCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACT
ATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAG
ATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAA
TGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCC
AAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACA
AAGGATCTCACCACATATGTACTCACTGATAAAGTGGAAATTAGCCCAAA
ACCTATGGATACCCANGAATTAGAATACAATTTCCTATCAACTTGAAACT
CCCGAAAAAATGAAGACTGAAGTGGGGACCCAATGCCCCCCCCTATAAAG
GGAAAAAAAAACCCCTGGAAGAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTCTACTAAGTATCTCTTAGAGATACGCTTCCGGTAAGGTGA
GTAGTTGCATTCAAATTTATATAAGAATGACATAGTGGAGTTCCAGTGCT
GACCTTCTGAGTCAGAATCTCCAGGGGCTTGAGATGGTACAACTCTCAAC
AGCTATAAATACATCTCATGAAGTTTAAGGAAGAGCTGGCTCCACGATTG
GGAGGATTTGTCCCAACTAACATGTTGAAGGTAAACATTAAGTGGTCATC
ATAATCATCTTTTTGTCTCCATGAAGTAGAGGAGACAAAGCTCTGTAAGG
CTCCAGGGTTCCATAACATGTCTCTCTCAGTAGCTCTTGCAGTTGCTTCT
AGATGTATACAGGTACAGCTTCTGTCCTTCTTCTTTATGCTCCTTGATTT
CTTAAGTCTCTGTATAACCCTACATTACTCCCTATCCTCTGAAATTCATA
GTAAACAATAACCTGAGGTATTGGCTCCCAAGATACTCACTCCCTGTTGT
TTATGGAGAGAAAAGCTGAAAGAAATCTGACTATAGACACAGACCACATC
AAGATATATTAGAAGAAAAATTANGGGTTCAATGAAAGACTAGTATAAGC
ATTTCCTTAATGGAGTTAGGGGTAATGAAATATACCTCTATGTTCTTTAC
CGCAACATATAAAAATGCCGAATAGTTTTTGGACTN

Query= MSMg01no367_k12.g1 MSMg01no367_k12.g1 CHROMAT_FILE:
MSMg01no367_k12.g1 PHD_FILE: MSMg01no367_k12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:53 2005
         (529 letters)



>mm_chr5_40057168_40058102
          Length = 935

 Score =  969 bits (501), Expect = 0.0
 Identities = 524/535 (97%), Gaps = 6/535 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctactaagtatctcttagagatacgcttccggtaaggtgagtagttgcattcaaattta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctactaagtatctcttagagatacgcttccggtaaggtgagtagttgcattcaaattta 260

                                                                       
Query: 61  tat------aagaatgacatagtggagttccagtgctgaccttctgagtcagaatctcca 114
           |||      |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatgattataagaatgacatagtggagttccagtgctgaccttctgagtcagaatctcca 320

                                                                       
Query: 115 ggggcttgagatggtacaactctcaacagctataaatacatctcatgaagtttaaggaag 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggcttgagatggtacaactctcaacagctataaatacatctcatgaagtttaaggaag 380

                                                                       
Query: 175 agctggctccacgattgggaggatttgtcccaactaacatgttgaaggtaaacattaagt 234
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctgtctccacgattgggaggatttgtcccaactaacatgttgaaggtaaacattaagt 440

                                                                       
Query: 235 ggtcatcataatcatctttttgtctccatgaagtagaggagacaaagctctgtaaggctc 294
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtcatcataatcatctttttgcctccatgaagtagaggagacaaagctctgtaaggctc 500

                                                                       
Query: 295 cagggttccataacatgtctctctcagtagctcttgcagttgcttctagatgtatacagg 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagggttccataacatgtctctctcagtagctcttgcagttgcttctagatgtatacagg 560

                                                                       
Query: 355 tacagcttctgtccttcttctttatgctccttgatttcttaagtctctgtataaccctac 414
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 tacagcttctgtccttcttctttatgctccttgatttcttaaatctctgtataaccctac 620

                                                                       
Query: 415 attactccctatcctctgaaattcatagtaaacaataacctgaggtattggctcccaaga 474
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attactccctgtcctctgaaattcatagtaaacaataacctgaggtattggctcccaaga 680

                                                                  
Query: 475 tactcactccctgttgtttatggagagaaaagctgaaagaaatctgactatagac 529
           ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 681 tactcactccctgttgtttatagagagaaaagctgaaagaaatctgactatagac 735


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 935
Length adjustment: 10
Effective length of query: 519
Effective length of database: 925
Effective search space:   480075
Effective search space used:   480075
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)