NCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTCATTTCTGAGCCCCATTTTTAATGGGGTTATTTGATT
TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC
CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT
CTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGGAGTTTCA
TTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTT
CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTTCAAGGCTTTTCCCCA
CTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTG
ATCCATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCG
CATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAA
TGCTGTCTTTCTTCCACTGGATGGTTTTACCTCCCTTGTCGAAAATCAGC
GACCATATGTGTGTGGGGTTATTTCTCGGGCTTCCAATTTTTCTTATTGG
TCTTACTGTTCGTGTCTAAAACACAAACATTGCCGTTTTTACCCAATTTT
TTTGTGTCTAAAGACCTAATTTCGGGGTCGGGGGATTCTCCCACACCTCC
TTTTTTCTTCACACAAATTTTTGTCTCTCCCCCCTTTTTTTTTTTTCCCC
CACCATCGCCCTTTTTGTTCTCTTTTTCCTTTCGTCCATATTTTTTTTCT
TCTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXAAAGTGATCTTTGATTTGTACCACAAACACCCCCGTTAGGGTTT
TACTCTGCTACAGCAGACTCTTCCAGTTAACAGTGGAAGCTTTTCACTTT
AAAAGTCTAAAATTCTATAACTAGCTTTTTCTTCTCCCTCTTATCTATAG
ATATTTATCATGTTGTTAAATAAAAGGTTTGGGGAAAAAAGCATACTTTT
CCAAGCTTTAAAACAAACATCTACAACTACAACAATTATCCTTCTGTTCA
ATAAACAGTTTTTCCACCTTTCTTATCCTTAATGAAGCTGGCCAAATGTT
TTATTGCTCCTAGCACTGATACCAAGAAAAAAGGGGGAAGGAAAAAGAAA
CCTGATATTGTCTGCTTTTGTTGCTCTAATATCTAATAAACTAGCTTAAA
TTATGACTTAAATAAAGTAATCATGTCTTATAGTACCAAATTCTTTTAAA
ATAAAGGAAAGTTTTAAAGATTTGGGGTCAGGCTCTAACCTCCCACGCAT
GCCAGGTAAGAATTGTCTTCATTTGGTGCAGGACTCTGAACCATCCAACC
ACTCAGAACCCTCACGCCTACAGACTATCATCACTTTCCACAAAAATATT
CTCATCCTAAACATTGCAATTATCTCACAGAACTTCAGAAAATTAAAATC
CCAGGAGTTAAGATTTAAGACAAATCCCAGAAAGCCAGCAGAACTGCTTT
AN

Query= MSMg01no367_l23.g1 MSMg01no367_l23.g1 CHROMAT_FILE:
MSMg01no367_l23.g1 PHD_FILE: MSMg01no367_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:00 2005
         (535 letters)



>mm_chr5_24978275_24979209
          Length = 935

 Score = 1027 bits (531), Expect = 0.0
 Identities = 534/535 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaagtgatctttgatttgtaccacaaacacccccgttagggttttactctgctacagcag 60
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 aaagtgatctttgatttgtaccacaaacacccccgctagggttttactctgctacagcag 260

                                                                       
Query: 61  actcttccagttaacagtggaagcttttcactttaaaagtctaaaattctataactagct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actcttccagttaacagtggaagcttttcactttaaaagtctaaaattctataactagct 320

                                                                       
Query: 121 ttttcttctccctcttatctatagatatttatcatgttgttaaataaaaggtttggggaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttcttctccctcttatctatagatatttatcatgttgttaaataaaaggtttggggaa 380

                                                                       
Query: 181 aaaagcatacttttccaagctttaaaacaaacatctacaactacaacaattatccttctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaagcatacttttccaagctttaaaacaaacatctacaactacaacaattatccttctg 440

                                                                       
Query: 241 ttcaataaacagtttttccacctttcttatccttaatgaagctggccaaatgttttattg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcaataaacagtttttccacctttcttatccttaatgaagctggccaaatgttttattg 500

                                                                       
Query: 301 ctcctagcactgataccaagaaaaaagggggaaggaaaaagaaacctgatattgtctgct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcctagcactgataccaagaaaaaagggggaaggaaaaagaaacctgatattgtctgct 560

                                                                       
Query: 361 tttgttgctctaatatctaataaactagcttaaattatgacttaaataaagtaatcatgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttgttgctctaatatctaataaactagcttaaattatgacttaaataaagtaatcatgt 620

                                                                       
Query: 421 cttatagtaccaaattcttttaaaataaaggaaagttttaaagatttggggtcaggctct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttatagtaccaaattcttttaaaataaaggaaagttttaaagatttggggtcaggctct 680

                                                                  
Query: 481 aacctcccacgcatgccaggtaagaattgtcttcatttggtgcaggactctgaac 535
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacctcccacgcatgccaggtaagaattgtcttcatttggtgcaggactctgaac 735


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space:   485625
Effective search space used:   485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)