CAGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTGTTTAGCTCTGAGCCCCATTTTTAATGGGGTTATTTGA
TTTCCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTC
CCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCC
TTTTTGTCTTATTGACGGTGTCTTTTGCCTATGCAGAAGCTTTGCAATTT
TATGATGTCCCATTTGTCGATTCTTGATCTTACAGCACAAGCCATTGCTG
TTCTATTCAGGAATTTTTCTTCTGTACCCATATCTTCGAGGCTTTTCCCT
ACTTTCTCCTCTATAAGTTTCAGTATTTCTGGTTTTATATGCAGTTCCTT
AATCCACTTAGATTTGACCTTCGTACAAGGAGATAGAAATGGATCAATTC
GCATTCTTCTACATGATAACTGCCAGTTGTGCCAGCACCATTTGTTGAAA
ATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATGAG
GTGACCATAGGTGTGTGGATTCATCTCTAGGTCTTCAATTCTGTTCCATT
GGTCTACTTGTCTGTCACTATACCAGTACCCTGCATCTTTGATCACAATT
GCTCTCGTACTACCGTTCTATGTTCTGCTTGGCGATTCCCTCATAAGTTT
TTTTTACTCCTGTATATATTTCCTCTCTTCCCTCCCGTTTTTTTCTATTC
CCCATTTTAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTCTGTGTTCTAGTGGCATGTACC
CATGGGGGTAGGCTACATTAAAGACAAAGGCAGGAGTATTGGGCTAGCCT
GAGCTACATTTTAAAAACAAGCTGGGTGTGGTAGTACATGCCTATAATTC
CAGTACTCGGGAGGCAGAAGTAGGTAGATCTCTGTGAGTTCCAGACTTGT
TTGTCAAGCTTGGAAATGCTATTTTAAAACAAAACAAAATAAAAATATTT
AAAACAATTTTTTCATACAATCCCTGAACATTCCTATCTTAAAACAAAAC
AAAAAACTGAAACTCATGTCTCTGGAAAATCAAATGTATTTTGCTAAAAA
ATACTTAATAGCTCACTCCAAGTGTTTCTTCAGCCTTCCCAGTTCAAGCT
GTGCACAAAGTGCAAACATGACATGAACTTACAATTTTTTGTTTGAAATA
TTAAAATGTGTGCTTCTATATAATGTGGATTTAACATAAAACTTTGAACC
AGAGATTTGTGATTTTTCAAAATAGAGGTTTTTTTTAACAGCACAAAATA
AAATTTATAGAAGGACATTAAACCATAAGACTTGGACCTTAGCCAACAAA
ATCAATGACTATTTAACTTTAGTGCGCACTGTCTTAAACTTGGGAGACTT
GAACTAAGATCATGAGGTTAACCGAGAATACCGACCCTTCTGCCCATGTC
TGAAATGGCCC

Query= MSMg01no367_n02.g1 MSMg01no367_n02.g1 CHROMAT_FILE:
MSMg01no367_n02.g1 PHD_FILE: MSMg01no367_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:05 2005
         (545 letters)



>mm_chr5_4897426_4898368
          Length = 943

 Score = 1006 bits (520), Expect = 0.0
 Identities = 542/554 (97%), Gaps = 9/554 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttctgtgttctagtggcatgtacccatgggggtaggctacattaaagacaaaggcagga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tttctgtgttctagtggcatgtacccatgggggtaggctacattaaagacaaaggcagga 249

                                                                       
Query: 61  gtattgggctagcctgagctacattttaaaaacaagctgggtgtggtagtacatgcctat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gtattgggctagcctgagctacattttaaaaacaagctgggtgtggtagtacatgcctat 309

                                                                       
Query: 121 aattccagtactcgggaggcagaagtaggtagatctctgtgagttccagacttgtttgtc 180
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aattccagtactagggaggcagaagtaggtagatctctgtgagttccagacttgtttgtc 369

                                                                       
Query: 181 aagcttggaaatgctattttaaaacaaaacaaaataaaaatatttaaaacaattttttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aagcttggaaatgctattttaaaacaaaacaaaataaaaatatttaaaacaattttttca 429

                                                                       
Query: 241 tacaatccctgaacattcctatctt------aaaacaaaacaa---aaaactgaaactca 291
           ||||| |||||||||||||||||||      ||||||||||||   ||||||||||||||
Sbjct: 430 tacaacccctgaacattcctatcttaaaaacaaaacaaaacaaaacaaaactgaaactca 489

                                                                       
Query: 292 tgtctctggaaaatcaaatgtattttgctaaaaaatacttaatagctcactccaagtgtt 351
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tgtctctggaaaatcaaatgtattttgctaaaaaatacttaatagctcactccaagtgtt 549

                                                                       
Query: 352 tcttcagccttcccagttcaagctgtgcacaaagtgcaaacatgacatgaacttacaatt 411
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tcttcagccttcccagttcaagctgtgcacaaagtgcaaacatgacatgaacttacaatt 609

                                                                       
Query: 412 ttttgtttgaaatattaaaatgtgtgcttctatataatgtggatttaacataaaactttg 471
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ttttgtttgaaatattaaaatgtgtgcttctatataatgtggatttaacataaaactttg 669

                                                                       
Query: 472 aaccagagatttgtgatttttcaaaatagaggttttttttaacagcacaaaataaaattt 531
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aactagagatttgtgatttttcaaaatagaggttttttttaacagcacaaaataaaattt 729

                         
Query: 532 atagaaggacatta 545
           ||||||||||||||
Sbjct: 730 atagaaggacatta 743


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 943
Length adjustment: 10
Effective length of query: 535
Effective length of database: 933
Effective search space:   499155
Effective search space used:   499155
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)