Query= MSMg01no369_m12.b1 MSMg01no369_m12.b1 CHROMAT_FILE:
MSMg01no369_m12.b1 PHD_FILE: MSMg01no369_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:36 2005
(172 letters)
>mm_chr5_76093248_76093820
Length = 573
Score = 286 bits (148), Expect = 4e-82
Identities = 163/168 (97%), Gaps = 1/168 (0%)
Strand = Plus / Minus
Query: 6 gaattcctttcttcc-cccctaaagatcaggagctgaggaccaaacttcagaagcaggat 64
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gaattcctttccacctcccctaaagatcaggagctgaggaccaaacttcagaagcaggat 314
Query: 65 ttgtgaacgttattagtggctactccagtcttcactctcgcagatctcaaagaaggaagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttgtgaacgttattagtggctactccagtcttcactctcgcagatctcaaagaaggaagt 254
Query: 125 ttctctgtatggttcttagctggtgattttttgtttgtttggtttttg 172
||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 253 ttctctgtatggtccttagctggtgatgttttgtttgtttggtttttg 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 573
Length adjustment: 8
Effective length of query: 164
Effective length of database: 565
Effective search space: 92660
Effective search space used: 92660
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no369_m12.g1 MSMg01no369_m12.g1 CHROMAT_FILE:
MSMg01no369_m12.g1 PHD_FILE: MSMg01no369_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:36 2005
(240 letters)
>mm_chr5_75868009_75868648
Length = 640
Score = 395 bits (204), Expect = e-114
Identities = 231/244 (94%), Gaps = 8/244 (3%)
Strand = Plus / Plus
Query: 1 actctacaacccagacagatcttgaatgtgtggttttcctgcctcactctcctgaatggt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 actctacaacccagacagatcttgaatgtgtggttttcctgcctcagtctcctgaatggt 260
Query: 61 tgagattacaggcctggtctatgaagccttgacagaaatccctttccctgactcatgcta 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagattacagtcctggtctatgaagccttgacagaaatccctttccctgactcatgcta 320
Query: 121 agtcttactagatcataactgactggcacattattagggtgtgatctttgggat----tt 176
||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |
Sbjct: 321 agtcttactagatcataactgactggcacgttattggggtgtgatctttgggatcagct- 379
Query: 177 tttataataccgcagaggttgcagcagagagcccagtcttgctgttttcaagcaagaatt 236
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ---ataataccccagaggttgcagcagagagcccagtcttgctgttttcaagcaagaatt 436
Query: 237 tgat 240
||||
Sbjct: 437 tgat 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
