Query= MSMg01no370_e19.b1 MSMg01no370_e19.b1 CHROMAT_FILE:
MSMg01no370_e19.b1 PHD_FILE: MSMg01no370_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:18 2005
(461 letters)
>mm_chr5_27357959_27358818
Length = 860
Score = 772 bits (399), Expect = 0.0
Identities = 411/415 (99%), Gaps = 1/415 (0%)
Strand = Plus / Minus
Query: 4 ggaattcccacactggaagcaggatatcttaatttccaagcttactaccacaaatacaag 63
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 414 ggaattcccacactggaagcaggatatcttaatttctaagcttactaccacaaatacaag 355
Query: 64 gaatccccataaggaaaacaccaaccaaaccaaatcatgttttttgttgtgctctgatat 123
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 354 gaatccccataaggaaaacaccaaccaaaccaaatcatg-tttttgttgtgctctgatat 296
Query: 124 ggggcaggaaggaaaagaagataattagtcatttaaggaaggcattacctcaggttgtat 183
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 295 ggggcaggaaggaaaagaagataattagtcattcaaggaaggcattacctcaggttgtat 236
Query: 184 cattggttcattatctacagaattttgctcacttgtttattaggatacagtgtttctcta 243
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 235 cattggttcattatctacagaattttgctcacttgtttattaggatacggtgtttctcta 176
Query: 244 tatagtcttggctatccaggaacttgctatgtagatcaggttggcctctaactcagagat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tatagtcttggctatccaggaacttgctatgtagatcaggttggcctctaactcagagat 116
Query: 304 ctgtctgtctctgcctcccaagtgctgtgattaaagacatgtaccaccactccctggctc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 ctgtctgtctctgcctcccaagtgctgtgattaaagacatgtaccaccactccctggctc 56
Query: 364 agctccacgtgacttaaccaggaaagtcaaagtcattattatcataggcttatta 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 agctccacgtgacttaaccaggaaagtcaaagtcattattatcataggcttatta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 860
Length adjustment: 10
Effective length of query: 451
Effective length of database: 850
Effective search space: 383350
Effective search space used: 383350
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_e19.g1 MSMg01no370_e19.g1 CHROMAT_FILE:
MSMg01no370_e19.g1 PHD_FILE: MSMg01no370_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:18 2005
(314 letters)
>mm_chr5_27163749_27164462
Length = 714
Score = 607 bits (314), Expect = e-178
Identities = 314/314 (100%)
Strand = Plus / Plus
Query: 1 attatagtattcattgggttctggattgctctgactatccacgaacaattctgaaggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attatagtattcattgggttctggattgctctgactatccacgaacaattctgaaggaag 260
Query: 61 ttatgtggggtactgagaaaaatgtgtattctttattgtttgagtgatatatcctgttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatgtggggtactgagaaaaatgtgtattctttattgtttgagtgatatatcctgttta 320
Query: 121 tccatttttaacagaaatgaaaacctctgagaaatacttttaaatattttaatgtattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccatttttaacagaaatgaaaacctctgagaaatacttttaaatattttaatgtattct 380
Query: 181 tttctatactagaaataataatcttaaaataaaatagcactaaaagatgtgtaaaattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttctatactagaaataataatcttaaaataaaatagcactaaaagatgtgtaaaattat 440
Query: 241 gattgtaaggaagtatgctgtacacctatcacattcttaagatatcttttgatataaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gattgtaaggaagtatgctgtacacctatcacattcttaagatatcttttgatataaatc 500
Query: 301 aagtctccttatgt 314
||||||||||||||
Sbjct: 501 aagtctccttatgt 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
