XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGCA
TGTTGCCAGTGTTGAGATGTTCCTTCATTCCTGCAGTTTAGGCCCGACCT
TCCCAAACCCATTCCTCAGACTGTCTGACTGCGTTCCAGCATTTCTCATG
ATTTCCTGTGCTGACTGGACCCAGGTTTTGAACCTTTGTTGGTCTTTTAA
ATGGTGTGTGTGTGCTGCTTTCTCAGTCTGAGGAGCGCCAAGTCACCGCA
TGCTACATTGCAGACAGAGAGCTGCTCTGTAGCTCACACTGTGAGGGTAC
ATTTGCATATTTTGTAACCATTTGGTAGCTTTTGACTGTGAGACTTGGGA
GAGGGTGCAAGGACTGCATCTCACTCATCTTCTTACCCCCGGGGTCAAAA
CTCTAAAGGATGAATGGACCCACTGCCTTGTAACAAGTCCACACAGTGTG
CATCGTTGCTTTCTGCTCTCTCGCTCTGAGGCTCTAAAAGACTTGTTCCA
GCTTATTCACTTGTAGATGAAAGAACCACCATTTCATCCTGGATTATCTC
TTTTAAGTCACCTTTAAAAAACTTTTTTAATGATTCTTTGTGAATTTCAC
ATCGTGCGGTCATCTCTAGTCCCTCCATATCTGCTCTCCACCCCTTGCAA
CTCCTCCCCCTAAGAAATCTTCACGTCTAAAAAATAAAAAATTATAAATC
AAATTTCTGTCGATACCTAACTGCGGCCCTTTGTCTCCCACTTTGTTCCT
TACTTTTCTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTCACCTGAGGAATACCAAATGGCTGAGAAGCACC
CGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACA
ACCCTGAGATTTCAGCTCACACCAGTCAGAATGGCTAAAATCAAAAATTC
AGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGGAACACTCCTCC
ATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGG
CAGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACC
TCTCCTGGGCATATATCCAGATGTTCCAACCGGTAAGAAGGACACATGCT
CCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAA
CCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTA
CACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCC
TAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGACGTAACCCAA
TCCCAAAAGATACGCACAATATGTACTCTCTGATAGGTGGAAATTACCCC
CCAAATTTTAAAACCCCTGAAATTAGATACATTTTGTTAATCCCGGAAAT
TCTCTAAAAAGAAAACCAAAGGGGGGAAATGGGGGCCCTTTTTAAATTGG
GAAAAAAACCCCCTGGGCCGGAGT

Query= MSMg01no372_n18.b1 MSMg01no372_n18.b1 CHROMAT_FILE:
MSMg01no372_n18.b1 PHD_FILE: MSMg01no372_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:42 2005
         (515 letters)



>mm_chr5_8345149_8346063
          Length = 915

 Score =  920 bits (476), Expect = 0.0
 Identities = 506/516 (98%), Gaps = 2/516 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtgttgagatgttccttcattcctgcagtttaggcccgaccttcccaaacccattcctc 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 715 agtgttgagatgttccttcattcctgcagtttaggcctgaccttcccaaacccattcctc 656

                                                                       
Query: 61  agactgtctgactgcgttccagcatttctcatgatttcctgtgctgactggacccaggtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 agactgtctgactgcgttccagcatttctcatgatttcctgtgctgactggacccaggtt 596

                                                                       
Query: 121 ttgaacctttgttggtcttttaaatggtgtgtgtgtgctgctttctcagtctgaggagcg 180
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 595 ttgaacctttgttggtcttttagatggtgtgtgtgtgctgctttctcagtctgaggagcg 536

                                                                       
Query: 181 ccaagtcaccgcatgctacattgcagacagagagctgctctgtagctcacactgtgaggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ccaagtcaccgcatgctacattgcagacagagagctgctctgtagctcacactgtgaggg 476

                                                                       
Query: 241 tacatttgcatattttgtaaccatttggtagcttttgactgtgagacttgggagagggtg 300
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 475 tacatttgcatattttgtaaccatttggtagcttttgaccgtgagacttgggagagggtg 416

                                                                       
Query: 301 caaggactgcatctcactcatcttcttacccccggggtcaaaactctaaaggatgaatgg 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 caaggattgcatctcactcatcttcttacccccggggtcaaaactctaaaggatgaatgg 356

                                                                       
Query: 361 acccactgccttgtaacaagtccacacagtgtgcatcgttgctttctgctctct-cgctc 419
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 355 acccactgccttgtaacaagtccacacagtgtgcatcgttgctttctgctctctccg-tc 297

                                                                       
Query: 420 tgaggctctaaaagacttgttccagcttattcacttgtagatgaaagaaccaccatttca 479
            |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 296 agaggctctaaaagacttgttccagtttattcacttgtagatgaaagaaccaccttttca 237

                                               
Query: 480 tcctggattatctcttttaagtcacctttaaaaaac 515
           |||||||||||||||||||||||| |||||||||||
Sbjct: 236 tcctggattatctcttttaagtcatctttaaaaaac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space:   457025
Effective search space used:   457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)