GCGGCCGCTATACGACTCCTATATTTCGAGGATCCGCGGAATTCTTTTTT
TCTTGTAATATGGGCTTCAAGAGGGTATAGTCTTGGAGAGGAGAGGGTGA
TAAATTATTCTACCTATGCCCAAGAGCCCAAGCCAAAGAGGAGGGGCTGG
TTGTTAAAGGTTCAGGGATTTGCAAACTGAACCTGTATTATAGATGCAGC
TATTATAGGATGAGAAGCTAAAGAATGAAAAAACTTGTAATTAAGAAACA
TTTTAAACAAAGATATTAAATACTAAAGCACCAACACTTTCGAATCATCT
TTCTGTATTTTATTTATTATGCTTGAAAAAAAATCGTTTACAGTTAGGCA
TGAAGGCAGAAAACTTGTGATCTCACCATTTTTGGAGACTGAGGGAGGGA
GATAGGGTGCTTGAGACCAGCCTGGGTTAGATTGCAAGGCCCTACGTTAA
ACAATAAATAACCAAAACCCCAAAAATCAAAATCAAATTGCTTAGATCTG
TGTTTATTATGGGAAAGGACATCACCTATTTATTTANTTATTTATTTACT
TATTTATTTATTTATTTATTTAAAGATAACGTCTCACTATGTATCTCTGG
GTGTCCCATTATCCCAATGAAAAAACGGAGGATTCCCCACTTTCCCAAAA
TTGGCCCCTAATTGTTAGAAAAAAAGGTAGGCCCTCCCCCGCCTGGTTTT
TCCCCTGAATTTTTATTTTGGTAAACTGTTCTCACCTATAATTGTTTTCT
ACCCTCTTCTAAGGCTATATATCCCCTACTCGCCTTTTCTATG

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXAGGGCAGCAGCTAGAGTCAAGAGCTCCGGGGTACT
GGTTAGTTCATAATGTTGTTGCACCTACAGGGTTGCAGATCTCTTTAGCT
CCTTGGATACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCA
ATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCTAGTCTCACA
AGAGACAGCTATATCACGATCCTTGCAGCAAAATCTTGCTAGTGTATGCA
ATGGTGTCATTGTTTAGAGGCTGATTATGGGATGGATCCCCAGATATGGC
AGTCTCTAAATGGTCCATTCTTTTGCCTCAGCTCCAAACTTTGTCTCTGT
AACTCCTTCCATGGGTGATTGTTCCCAATTCTAAGAAGGGGCAAAGTGTC
CACACTTTTGGGCTTCGCTCTTCTTCANGTTCATGTGTTTTGCAAATTGT
ATCTTATATCTCAGGGATACAAAGGTTCGGGGGTAAATTCCCTTATCATT
GGGCACATATCATTTGGAGGCCCTGATCCTACCCGCGCTAATTTCTCCCC
CCCTGGAAAGAAAAGCCCCTTTGGTTGGGGGGACTTTTTTTGCCCCCCCA
CTGGGAAAGCCCCGGGCTTTAAAAGGGTATTATTTGTCACCTTAATTATC
CATATTCTTTTCTTATTCCCTCTCCTTTTTCCCCTCCACGTTTACCCTCT
CATCCTTCTCCCCATTATTTCCCGTTTTCTTTCCTTTTCACGCTCTTTTA
CCTTTCCTCTCTG

Query= MSMg01no372_o22.b1 MSMg01no372_o22.b1 CHROMAT_FILE:
MSMg01no372_o22.b1 PHD_FILE: MSMg01no372_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:47 2005
         (491 letters)



>mm_chr5_90380330_90381219
          Length = 890

 Score =  845 bits (437), Expect = 0.0
 Identities = 470/485 (96%), Gaps = 9/485 (1%)
 Strand = Plus / Minus

                                                                       
Query: 7   gaattctttttttcttgtaatatgggcttcaagagggtatagtcttggagaggagagggt 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gaattctttttttcttgtaatatgggcttcaagagggtatagtcttggagaggagagggt 449

                                                                       
Query: 67  gataaattattctacctatgcccaagagcccaagccaaagaggaggggctggttgttaaa 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gataaattattctacctatgcccaagagcccaagccaaagaggaggggctggttgttaaa 389

                                                                       
Query: 127 ggttcagggatttgcaaactgaacctgtattatagatgcagctattataggatgagaagc 186
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ggttcagggatttgcaaattgaacctgtattatagatgcagctattataggatgagaagc 329

                                                                       
Query: 187 taaagaatgaaaaaacttgtaattaagaaacattttaaacaaagatattaaatactaaag 246
           ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 328 taaaggatgaaaaaacttgtaattaag-aacattttaaacaaagatattaaatactaaag 270

                                                                       
Query: 247 caccaacactttcgaatcatctttctgtattttatttattatgcttgaaaaaaaatcgtt 306
           ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 269 caccaacactttcaaatcatctttctgtattttgtttattatgcttgaaaaaaaatcgtt 210

                                                                       
Query: 307 tacagttaggcatgaaggcagaaaacttgtgatctcaccatttttggagactgagggagg 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tacagttaggcatgaaggcagaaaacttgtgatctcaccatttttggagactgagggagg 150

                                                                       
Query: 367 gagatagggtgcttgagaccagcctgggttagattgcaaggccctacgttaaacaataaa 426
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 149 gagatagggtgcttgagaccagcctgggttagattgcaaggccctactttaaacaataaa 90

                                                                       
Query: 427 taaccaaaaccccaaaaatcaaaatcaaattgcttagatctgtgtttattatgggaaagg 486
            ||||||||||| |||||       |||||||||||||||||||||||||||||||||||
Sbjct: 89  caaccaaaaccc-aaaaa-------caaattgcttagatctgtgtttattatgggaaagg 38

                
Query: 487 acatc 491
           |||||
Sbjct: 37  acatc 33


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 890
Length adjustment: 10
Effective length of query: 481
Effective length of database: 880
Effective search space:   423280
Effective search space used:   423280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)