Query= MSMg01no374_j15.b1 MSMg01no374_j15.b1 CHROMAT_FILE:
MSMg01no374_j15.b1 PHD_FILE: MSMg01no374_j15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:53 2005
(345 letters)
>mm_chr5_35957803_35958547
Length = 745
Score = 559 bits (289), Expect = e-163
Identities = 310/317 (97%), Gaps = 4/317 (1%)
Strand = Plus / Minus
Query: 1 gaaagagttctgattgcaaagcttaagccacttcaatccaaagcaaggcct-gtgactaa 59
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 316 gaaagagttctgattgcaaagcttaagccacttcaatccaaagcaagg-ctagtgactaa 258
Query: 60 tgagagtaaataatttacaaagggtgactatgcgtttctactttccatggccacgaatgg 119
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 257 tgagaggaaataatttacaaagggtgactacgcgtttctactttccatggccacgaatgg 198
Query: 120 tggtgcacacctttaatgtcagtacttgggaggcagaagcaggcagagctctgtgagttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tggtgcacacctttaatgtcagtacttgggaggcagaagcaggcagagctctgtgagttt 138
Query: 180 gaagccagcagtctataaaaagttctaggacagccaaggctatgcagacagaccctgact 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gaagccagcagtctataaaaagttctaggacagccaaggctatgcagacagaccctgact 78
Query: 240 caaaaccaaaccaaactaaaaaacaaaaata-ttttacagatacaaca-gttgagtttaa 297
||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 77 caaaaccaaaccaaactaaaaaacaaaaatatttttacagatacaacactttgagtttaa 18
Query: 298 ctgcttcattaggcgac 314
|||||||||||||||||
Sbjct: 17 ctgcttcattaggcgac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_j15.g1 MSMg01no374_j15.g1 CHROMAT_FILE:
MSMg01no374_j15.g1 PHD_FILE: MSMg01no374_j15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:53 2005
(217 letters)
>mm_chr18_65702394_65703010
Length = 617
Score = 420 bits (217), Expect = e-122
Identities = 217/217 (100%)
Strand = Plus / Minus
Query: 1 tacacagtcatcaaccctctcccctaacccaagaaacccacaacaaaacaaaacaaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tacacagtcatcaaccctctcccctaacccaagaaacccacaacaaaacaaaacaaaact 358
Query: 61 cccaaatcatggctaacagagttagcaacaaggcagcccaagaacagtaagtgcttcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cccaaatcatggctaacagagttagcaacaaggcagcccaagaacagtaagtgcttcacc 298
Query: 121 atcaaccagcacagatagactgccagccccaattgcagggtgacttcttagtttccttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atcaaccagcacagatagactgccagccccaattgcagggtgacttcttagtttccttac 238
Query: 181 aagggctggctttgagcactggtcctgagatacacaa 217
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 aagggctggctttgagcactggtcctgagatacacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 617
Length adjustment: 9
Effective length of query: 208
Effective length of database: 608
Effective search space: 126464
Effective search space used: 126464
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
