TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCACTTTGTATACCAGGCTGGCCTCAAACTCAGAAATCCTCGTGCCTTTG
CCTCCTGAGTGCTGGGATTAAAATCCTGTGCCACCATACCTGGCTCAAAG
AATTCTTAATAGAGGAAACTCAAATGGCTGAGAAACACTTCAGTAAATGT
TCAACATACTTAGTTGTTAGGGAAATTTGATTTAGATAGGGTTTCATTGC
TGTGAAGAGACACCATCATCATGACAACTTTTTAAAATGAAAACATTTAA
TTGGTTCTGGTTTACACTTTCAGAGACTTAGTCCATTATCATCATGGTGG
GGACCATGGCAACAAGCATGGCAGCGTGCAGGCAACCATGGTGCTGGAGC
AGCTGAGAGTTCCATATCTTGATCTCCAGGTAGCAGAAAGAAACTGTGTG
CCATAATGGGCATAGCTTGAGCATTGGAGATCTCAAAACCTGTCCCCACA
TTAACACACTTTTTCCAACAAGACCACACCCACTCCCCCTGATAGTCTAT
TCTCTATGGGCCAAGCATTTAAATACATAAATCTATAGGGCCATACCCAT
TTAAACCAACACAAAATGCAAGTCAAAACTATTTTGAGATTCCATCTTAC
AACTGTCAGAATGACTAAGATCAATAACACAAGTGAAAGCTCATGCCGAT
GAGGATGTAGAAACAAGGGGATGCCCCTCCTTTGCTTGTGGGAGTGA

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTATAAAAATGAGAATTTACCTTCTAAAG
TTTTCAAAATGTATGAGTCAAAAGATAGAAGAATAGGATACTTCACTTTA
TAACAGGCCTCTGTCCTGGAAATGAGTCACCAAGGGTTCTTTTAGAGCCA
GCGTCCTGGTGGTGAGGGTTTGGCTTTGGGAACAGAAAGGTGGAGCTGCC
CTTTTCCTGAGTAGCTGTGAACGCTCTGGAAAGCACACCCCGAAAGTGAA
GAGGGCACCTCTGGGTCTTCACCCTCTGAGGTGTGGAACTAGTACCTCTA
TGACTTAGCCAGCCATGGCTTCTTGGAAGTCAACGAGGACCTTTGGTAGC
AGTTCCACTGGCAAGCGTCCTCACTCTGTAAAGCTCTGAAAACTCCAGTT
CTCAGAAGGACTTAACAGGAAGCCTCGCCCAGTAGCAGAGGAAGCTGAGG
AAGGAAGGAAAGATGGCAGGGCTGGGGGAGGGGCAGCAGTCTAAACAATG
AATGAAGTCATGGCCTTGGAACTCTATGTGGTCAACGACACACCCCACTT
GTGTGCCCCACTGGTCCAGAAGCTCAGTACAGCATCTTCTCTCTTGCTGG
NCTGNCTCACTTCATTCTCAGGTTGGCCTAGAAATGTCCTCAGGGNCCTT
GTCACTGGAGACTTCCTTTCCCTGTTCCTCTACACCTCCTCCAGTCTN

Query= MSMg01no376_p01.g1 MSMg01no376_p01.g1 CHROMAT_FILE:
MSMg01no376_p01.g1 PHD_FILE: MSMg01no376_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:57 2005
         (611 letters)



>mm_chr5_54339623_54340633
          Length = 1011

 Score = 1139 bits (589), Expect = 0.0
 Identities = 605/611 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tataaaaatgagaatttaccttctaaagttttcaaaatgtatgagtcaaaagatagaaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 tataaaaatgagaatttaccttctaaagttttcaaaatgtatgagtcaaaagatagaaga 752

                                                                       
Query: 61  ataggatacttcactttataacaggcctctgtcctggaaatgagtcaccaagggttcttt 120
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 atgggatacttcactttataacaggcctctgtcctggaaatgagtcaccaagggttcttt 692

                                                                       
Query: 121 tagagccagcgtcctggtggtgagggtttggctttgggaacagaaaggtggagctgccct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tagagccagcgtcctggtggtgagggtttggctttgggaacagaaaggtggagctgccct 632

                                                                       
Query: 181 tttcctgagtagctgtgaacgctctggaaagcacaccccgaaagtgaagagggcacctct 240
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tttcctgagtagctgtgaatgctctggaaagcacaccccgaaagtgaagagggcacctct 572

                                                                       
Query: 241 gggtcttcaccctctgaggtgtggaactagtacctctatgacttagccagccatggcttc 300
           ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 571 gggtcttcaccctctgaggtgtggaactagtacctctgtgacttagccagctatggcttc 512

                                                                       
Query: 301 ttggaagtcaacgaggacctttggtagcagttccactggcaagcgtcctcactctgtaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ttggaagtcaacgaggacctttggtagcagttccactggcaagcgtcctcactctgtaaa 452

                                                                       
Query: 361 gctctgaaaactccagttctcagaaggacttaacaggaagcctcgcccagtagcagagga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gctctgaaaactccagttctcagaaggacttaacaggaagcctcgcccagtagcagagga 392

                                                                       
Query: 421 agctgaggaaggaaggaaagatggcagggctgggggaggggcagcagtctaaacaatgaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 agctgaggaaggaaggaaagatggcagggctgggggaggggcagcagtctaaacaatgaa 332

                                                                       
Query: 481 tgaagtcatggccttggaactctatgtggtcaacgacacaccccacttgtgtgccccact 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tgaagtcatggccttggaactctatgtggtcaacgacacaccccacttgtgtgccccact 272

                                                                       
Query: 541 ggtccagaagctcagtacagcatcttctctcttgctggnctgnctcacttcattctcagg 600
           |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 271 ggtccagaagctcagtacagcatcttctctcttgctggcctggctcacttcattctcagg 212

                      
Query: 601 ttggcctagaa 611
           |||||||||||
Sbjct: 211 ttggcctagaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space:   601601
Effective search space used:   601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)