Query= MSMg01no377_e20.b1 MSMg01no377_e20.b1 CHROMAT_FILE:
MSMg01no377_e20.b1 PHD_FILE: MSMg01no377_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:26 2005
(430 letters)
>mm_chr5_32234628_32235458
Length = 831
Score = 764 bits (395), Expect = 0.0
Identities = 419/427 (98%), Gaps = 1/427 (0%)
Strand = Plus / Plus
Query: 5 gaattctttagat-tttgtaatgtactttgacatttgtggtgctctccctaaacggtggt 63
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttagaaatttgtaatgtactttgacatttgtggtgctctccctaaacggtggt 264
Query: 64 tagatcctgggcaagagaacattgtgtttagtctctgaaccttgtgcttcatacctgggt 123
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 265 tagatcctgggcaagagaacattgtgtttggtctctgaaccttgtgcttcatacctgggt 324
Query: 124 agtacagataagtcaagcactcttgagatacttgagatatgctttatttctgtagatgac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtacagataagtcaagcactcttgagatacttgagatatgctttatttctgtagatgac 384
Query: 184 acctggaagaagccagatattgcatgaatggttaaagcccagactccacagtcaagcagg 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acctggaagaagccagatattgcatgaatggttaaagcccagactccacagtcaagcaga 444
Query: 244 tctggatttggatgcaacctctagtgatctgccagtgatcctggacaggttccttagtct 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctggatttggatgcaacctctagtgatctgccagtgatcctggacaggttccttagtca 504
Query: 304 gttcaacctcagcttcgccacttataatgtggctgtgaagagcaaattgaatagcacttg 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 505 gttcaacctcagcttcgccacttataatgtggctgtgaagagcaaattgaatagcactcg 564
Query: 364 gtgaaccatggctctcgctagcttgggctcctggtgccaggctgctgctcggttgctgag 423
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 565 gtgaaccatggctctcgctagcttgggctcctggtgccaggctgctgctccgttgttgag 624
Query: 424 atgacct 430
|||||||
Sbjct: 625 atgacct 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 831
Length adjustment: 9
Effective length of query: 421
Effective length of database: 822
Effective search space: 346062
Effective search space used: 346062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_e20.g1 MSMg01no377_e20.g1 CHROMAT_FILE:
MSMg01no377_e20.g1 PHD_FILE: MSMg01no377_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:26 2005
(327 letters)
>mm_chr5_32462986_32463712
Length = 727
Score = 625 bits (323), Expect = 0.0
Identities = 326/327 (99%)
Strand = Plus / Minus
Query: 1 ttctggagccagtgttttccaacacattcagcaacatttgctggggtgaatgagacggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttctggagccagtgttttccaacacattcagcaacatttgctggggtgaatgagacggtg 363
Query: 61 tatgtgaaggcatacagaaaggtatgaggctaaaggagggaggtgccatatctataaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tatgtgaaggcatacagaaaggtatgaggctaaaggagggaggtgccatatctataaata 303
Query: 121 ataagccaatagttattttagtttattttcaatgtgctaatgtttttttttccagtttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ataagccaatagttattttagtttattttcaatgtgctaatgtttttttttccagtttgg 243
Query: 181 aaaacggaattgttgcaatcctcagacatgttacctaaaaataaaccacagagacagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaaacggaattgttgcaatcctcagacatgttacctaaaaataaaccacagagacagaca 183
Query: 241 gcaggctggtggctgtcagggatggggaagggaggtggactgcttaatatgcaaggtttc 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 182 gcaggctggtggctgtcagggatggggaagggaggtggactgcttaatatacaaggtttc 123
Query: 301 tttcatggtgacaagaatgttctggat 327
|||||||||||||||||||||||||||
Sbjct: 122 tttcatggtgacaagaatgttctggat 96
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
