Query= MSMg01no377_g12.b1 MSMg01no377_g12.b1 CHROMAT_FILE:
MSMg01no377_g12.b1 PHD_FILE: MSMg01no377_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:34 2005
(332 letters)
>mm_chr5_98083573_98084306
Length = 734
Score = 592 bits (306), Expect = e-173
Identities = 327/334 (97%), Gaps = 2/334 (0%)
Strand = Plus / Minus
Query: 1 gaatgtattcaaagctctgacagaaaatagcaaatgacaactcactatttaaatatacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gaatgtattcaaagctctgacagaaaatagcaaatgacaactcactatttaaatatacct 475
Query: 61 tccaggcttgtcagccaaagcaaaccgtttggaaatacatggtttttactagttagcata 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tccaggcttgtcagccaaagcaaaccgtttggaaatacatggtttttactagttagcatc 415
Query: 121 tactaagaaagggctataattccagaactttggtacggaaaagctactaatggtacatct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 414 tactaagaaagggctataattccagaactttggtacggaaaagctactaatgctacatct 355
Query: 181 ttctaacttcccgagcgtgtgagaagtgaagtctttgaggtgagggctccaaaccaacga 240
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ttctaacttcctgagcatgtgagaagtgaagtctttgaggtgagggctccaaaccaacga 295
Query: 241 gtcttctg-tt-tatatatatataatctcttatatttgtcttccctgctttcctggggaa 298
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gtcttctgcttatatatatatataatctcttatatttgtcttccctgctttcctggggaa 235
Query: 299 cctatggggaaggatggaggggaaagtgccaggc 332
|||||||||||||||||||||||||||||||||
Sbjct: 234 gctatggggaaggatggaggggaaagtgccaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 734
Length adjustment: 9
Effective length of query: 323
Effective length of database: 725
Effective search space: 234175
Effective search space used: 234175
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_g12.g1 MSMg01no377_g12.g1 CHROMAT_FILE:
MSMg01no377_g12.g1 PHD_FILE: MSMg01no377_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:34 2005
(423 letters)
>mm_chr5_97877924_97878746
Length = 823
Score = 797 bits (412), Expect = 0.0
Identities = 421/424 (99%), Gaps = 2/424 (0%)
Strand = Plus / Plus
Query: 1 acaggatctgggaaacaaaagttttttctgtcttgcagaatgaaaggattttttaggtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaggatctgggaaacaaaagttttttctgtcttgcagaatgaaaggattttttaggtga 260
Query: 61 ctccttgttggggaaataagtaggaagcttgctctgtagagtagaactttttgtctaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctccttgttggggaaataagtaggaagcttgctctgtagagtagaactttttgtctaaga 320
Query: 121 gtctatttccagattttatgatgttt-gtgactaaggaaacaactcctcaaagaatctgt 179
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 gtctatttccagattttatgatgttttgtgactaaggaaacaactcctcaaagaatctgt 380
Query: 180 aagcatttttaaaagaagttaaaatcataagtgaataaagagttttattataattttgaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagcatttttaaaagaagttaaaatcataagtgaataaagagttttattataattttgaa 440
Query: 240 tcttctattagtgtgcttagaataatttgcaacaaaagttgtatgtacacatatatacat 299
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttctag-agtgtgcttagaataatttgcaacaaaagttgtatgtacacatatatacat 499
Query: 300 tctccaaattgctcatttgacaagacaaaattcaaaatttcataagaaatcttataggtg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tctccaaattgctcatttgacaagacaaaattcaaaatttcataagaaatcttataggtg 559
Query: 360 tgtgtatcattgccttcatcttgtaagatgtatcacagtattgtttgaggcaatagaaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgtgtatcattgccttcatcttgtaagatgtatcacagtattgtttgaggcaatagaaaa 619
Query: 420 aaat 423
||||
Sbjct: 620 aaat 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
