Query= MSMg01no379_a04.b1 MSMg01no379_a04.b1 CHROMAT_FILE:
MSMg01no379_a04.b1 PHD_FILE: MSMg01no379_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:39 2005
(600 letters)
>mm_chr5_69872876_69873877
Length = 1002
Score = 600 bits (310), Expect = e-175
Identities = 328/334 (98%), Gaps = 2/334 (0%)
Strand = Plus / Plus
Query: 269 aagttggactgacagacaataaaatatgaatagcttgacggctatgttcagctcatgtta 328
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 469 aagttggactgacagacaataaaatatgaatagcttgtcggctatgttcagctcatgtta 528
Query: 329 taataaataatttagaatatttcatttggaactt-aaaataatataggatatcttacatc 387
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 529 taataaataatttagaatatttcattcggaactttaaaataatataggatatcttacatc 588
Query: 388 aaaagttttaaacaatgaattatatctaaatatctttactgttagttttagaaaagattt 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aaaagttttaaacaatgaattatatctaaatatctttactgttagttttagaaaagattt 648
Query: 448 tgaagcacaatctttatcatataaaaaa-ctaatttttcaataattttaggttctgctgt 506
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 649 tgaagcacaatctttatcatataaaaaaactaatttttcaataattttaggttctgctgt 708
Query: 507 tgagtaataaccaagtttacaagcaaaatatacatttacaaggttatatgttccaaattc 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tgagtaataaccaagtttacaagcaaaatatacatttacaaggttatatgttccaaattc 768
Query: 567 tacaaaattttacaaagatagaactgtgttcttt 600
||||||||||||||| |||||||||||||||||
Sbjct: 769 aacaaaattttacaaaaatagaactgtgttcttt 802
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1002
Length adjustment: 10
Effective length of query: 590
Effective length of database: 992
Effective search space: 585280
Effective search space used: 585280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_a04.g1 MSMg01no379_a04.g1 CHROMAT_FILE:
MSMg01no379_a04.g1 PHD_FILE: MSMg01no379_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:39 2005
(527 letters)
>mm_chr5_70068009_70068934
Length = 926
Score = 1004 bits (519), Expect = 0.0
Identities = 525/527 (99%), Gaps = 1/527 (0%)
Strand = Plus / Minus
Query: 1 ctggaattaaattcactctatgcctagtcatgaccctacacaactgaccctcttgattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ctggaattaaattcactctatgcctagtcatgaccctacacaactgaccctcttgattcc 667
Query: 61 ccctacagagagtcactgcactcaactttttaattttgttttgtttaatccctttgctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ccctacagagagtcactgcactcaactttttaattttgttttgtttaatccctttgctca 607
Query: 121 gatgttggcccacctaaatgtgtgcattgaaaataaatcatttaagagcagtcttttaag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 606 gatgttggcccacctaaatgtgtgcattgaaaataaatcatttaagagcagtctattaag 547
Query: 181 tgagactacttattataaatgttcatataacttgcaatatctagtagtgaaattaaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tgagactacttattataaatgttcatataacttgcaatatctagtagtgaaattaaattt 487
Query: 241 tgtgtatttctgcacataataagtattcagcaattcaattttgtatatttctgctgataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tgtgtatttctgcacataataagtattcagcaattcaattttgtatatttctgctgataa 427
Query: 301 taagtatttaaaatcccaccatttaattacagagagtaatgttttatatactcaaagcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 taagtatttaaaatcccaccatttaattacagagagtaatgttttatatactcaaagcat 367
Query: 361 ttattttggtatttcctctttaattctccattgaatatgttttaataatcttcatttcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttattttggtatttcctctttaattctccattgaatatgttttaataatcttcatttcat 307
Query: 421 atgaatttacaatatgtacaatctatattttgacataacaaactcacagtattgctgctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 atgaatttacaatatgtacaatctatattttgacataacaaactcacagtattgctgctt 247
Query: 481 gcagatacttatttcacccaacatcattcagagtacacattgtttta 527
|||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 246 gcagatacttatttcacccaacatca-tcagagtacacattgtttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 926
Length adjustment: 10
Effective length of query: 517
Effective length of database: 916
Effective search space: 473572
Effective search space used: 473572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
