Query= MSMg01no380_k10.b1 MSMg01no380_k10.b1 CHROMAT_FILE:
MSMg01no380_k10.b1 PHD_FILE: MSMg01no380_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:47 2005
(503 letters)
>mm_chr5_129159495_129160397
Length = 903
Score = 569 bits (294), Expect = e-166
Identities = 360/394 (91%), Gaps = 22/394 (5%)
Strand = Plus / Minus
Query: 1 tgggctctcacgagtaggcagagctgatctcttcatgactatgatggctgtttgcttctg 60
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||
Sbjct: 393 tgggctctcacgagtaggcatagctgatctcttcatgagtatgatggctgtttgcctctg 334
Query: 61 aggatagcaccttgctacagagaccaaggtgatgagggatggagactgaggcctgtggca 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aggataacaccttgctacagagaccaaggtgatgagggatggagactgaggcctgtggca 274
Query: 121 gcagaaggtggcaaagcagagtagggagtgggcagtgtggtca-gaggagacatctaggc 179
|||||| |||||||||||||| ||||||||||||||||||||| || |||||| ||||||
Sbjct: 273 gcagaaagtggcaaagcagagcagggagtgggcagtgtggtcagga-gagacagctaggc 215
Query: 180 aatttctgaagcagggtgtcatgctttgaacatgcttggcccagagagtggcccttttag 239
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 214 aatttctgaagcagagtgtcatgctttgaacatgcttggcccagagagtggcacttttag 155
Query: 240 gaggtg-------gttct-------------ttgttgtggtgggtgtggccttgttgcag 279
|||||| ||| | |||||||||||||||||||||||||| ||
Sbjct: 154 gaggtgtggccttgttgtggtgggtgttgccttgttgtggtgggtgtggccttgttgaag 95
Query: 280 taggtgtgtcactgagggcgtgggctttaagaccctcatcctagctgcctggaagtcagt 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 taggtgtgtcactgagggcgtgggctttaagaccctcatcctagctgcctggaagtcagt 35
Query: 340 attctgctaacagccttcaaatgaagatgtagaa 373
|||||||||||||||||||||| |||||||||||
Sbjct: 34 attctgctaacagccttcaaataaagatgtagaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_k10.g1 MSMg01no380_k10.g1 CHROMAT_FILE:
MSMg01no380_k10.g1 PHD_FILE: MSMg01no380_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:47 2005
(449 letters)
>mm_chr5_128973930_128974778
Length = 849
Score = 760 bits (393), Expect = 0.0
Identities = 414/421 (98%)
Strand = Plus / Plus
Query: 29 cccccacccacacccacacaccctttttgagacagtgtttctctgtgcagcgctgaaact 88
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 cccccacccccacccacacaccctttttgagacagtgtttctctgtgcagcgctgaaact 288
Query: 89 ctctttgtagaccaggcaggctgacctgaaacttaaagagatctgcctgtctctgcttag 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ctctttgtagaccaggcaggctgacctgaaacttaaagagatctgcctgtctctgcttag 348
Query: 149 ggagtactaaaatcaaaggtctgagccaccatcgccctgccttccaaagcactgtttttt 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ggagtactaaaatcaaaggtctgagccaccatcgccctgccttccaaagcactgtttttt 408
Query: 209 aaacctccactttcctcccaggggacccaagattttttattgtgaatgacaatggctggc 268
|||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||
Sbjct: 409 aaacctccactttcctcccaggggacccaagagtccttagtgtgaatgacaatggctggc 468
Query: 269 acccccagtgggtagtggaggacaattcaccagcatcttcagcttggccctggctgtgga 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 acccccagtgggtagtggaggacaattcaccagcatcttcagcttggccctggctgtgga 528
Query: 329 catcacagatgcgaagaaattgtgtcctgtttccctccagtagtcagctcaattgacgac 388
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 529 catcacagatgtgaagaaattgtgtcctgtttccctccagtagtcagctcaactgacgac 588
Query: 389 ctctgagcctgcttttccccctccatggctgtctctggggtctggacctctttgagccag 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ctctgagcctgcttttccccctccatggctgtctctggggtctggacctctttgagccag 648
Query: 449 t 449
|
Sbjct: 649 t 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
