Query= MSMg01no382_a14.b1 MSMg01no382_a14.b1 CHROMAT_FILE:
MSMg01no382_a14.b1 PHD_FILE: MSMg01no382_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:39 2005
(586 letters)
>mm_chr5_92775265_92776250
Length = 986
Score = 688 bits (356), Expect = 0.0
Identities = 378/386 (97%), Gaps = 2/386 (0%)
Strand = Plus / Minus
Query: 5 gaattctttcagagatttagagactcaatggcctgaacaagaagttggggtgggtgggag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 384 gaattctttcagagatttagagactcaatggcctgaacaagaagttggggtgggtaggag 325
Query: 65 acaaacaagtcaggagaactaccacactacttcttggtttagcctccttcgaggctgatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acaaacaagtcaggagaactaccacactacttcttggtttagcctccttcgaggctgatc 265
Query: 125 gtgtaggcttcctgtgactggtgaggcaaaaaaggaaaaggcctgagtctcagtggaccc 184
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 264 gtgtaggcttcctgtgactggtgaggcaaaaagggaaaaggcctgagtctcagtggaccc 205
Query: 185 tgtcctgatgagttttcactgtcaactccacacagctgagagtccctgggaagaaggtgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tgtcctgatgagttttcactgtcaactccacacagctgagagtccctgggaagaaggtgg 145
Query: 245 gcttgtgtgggtgagcagactggcctgtggccatgtgtgggtgatcgccccttgactgct 304
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 144 gcttgtgtgggtgagcagactggcctgtggccatgtgtggctgatcgcc--ttgactgct 87
Query: 305 cctcagcccactcagggcagtgccaccctgaccgggtggacctgggttacataagaaaac 364
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 86 cctcagcccactcagggcagtgccaccctgaccaggtggtcctgggttacataagaaaac 27
Query: 365 tagttgagcatgagccgggggaagca 390
|||||||||||||||| |||||||||
Sbjct: 26 tagttgagcatgagccaggggaagca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_a14.g1 MSMg01no382_a14.g1 CHROMAT_FILE:
MSMg01no382_a14.g1 PHD_FILE: MSMg01no382_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:39 2005
(469 letters)
>mm_chr5_92632444_92633312
Length = 869
Score = 899 bits (465), Expect = 0.0
Identities = 468/469 (99%)
Strand = Plus / Plus
Query: 1 tatacagtgtgttttggtcatatttacctacctgccttaactctccagcaccaggtctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatacagtgtgttttggtcatatttacctacctgccttaactctccagcaccaggtctgc 260
Query: 61 atgtgttctgccatgttccccacaataaagataatagattaaacctctgaaaccataagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtgttctgccatgttccccacaataaagataatagattaaacctctgaaaccataagc 320
Query: 121 cagcacccgttaaatgctttccttattaagaggtgctgtggtcatggtgatgcttcacag 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagcacccattaaatgctttccttattaagaggtgctgtggtcatggtgatgcttcacag 380
Query: 181 aaatggagcacgaactaagacaggccttgttctgccctgcagaactcatcttcattgcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatggagcacgaactaagacaggccttgttctgccctgcagaactcatcttcattgcca 440
Query: 241 aagcaaaactcattgattcagctccaagcactgaggatacagaggggaagacaaaagccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagcaaaactcattgattcagctccaagcactgaggatacagaggggaagacaaaagccc 500
Query: 301 tgtttaacttacattctagagtaagtaccaataaatacagtcaagtgctctgtagctttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtttaacttacattctagagtaagtaccaataaatacagtcaagtgctctgtagctttt 560
Query: 361 ggaaagaagtctgcatgttgttcagaattggatgagaagccagaagagtgattagataca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggaaagaagtctgcatgttgttcagaattggatgagaagccagaagagtgattagataca 620
Query: 421 cgactctccatagatcccatctctcctatgttgagaattgtctggggca 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgactctccatagatcccatctctcctatgttgagaattgtctggggca 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
