TCAAATTTGCGGCGCTAACGACTCACTATTTCGCACCGCGCGGAATCAGG
AGTATGACAACACAGGCTACTGTTATGACAGCCTACGATAAACTATGCTC
AGAAGAGGTTCTGCTCTCTGTAACATACTCTATGGCCTGTAACAACTCCA
ACCTATTTCTACTGGCTCTTTATTATTTTATTTATTTTTGAGACAGGGTT
CTCTGTATAGCTCTGGCTGTCCAGGAACTCACTCTGTATACCAGGCTGGC
CTCAAACTCAGAAATCTGTCTGCCCTTGCCTCCCAAGTGTTGGGATTAAA
ATGTGCTCCTTACTGCCCACGGCTCTTTAATTATTGCAGCTGCTTTTTCT
ACCCCCACCAACACTATTTGTTAAAACGAAACACACAGAGGTCACGCACC
CCTTTGTGATCTCAAGGCTAGTCTGGGATATATAGTAAAGCCTATTTAAT
TAATAATCTCTTTCATTACTATGTTTCATCCAAACTTGAAATCCATGATG
AAAGTACTTTTCCCTTTCTTCTTCTGACACCTATGATCTCACTGTTTATC
CAGACTGGTCTCAAAGTCTGTACGCCACCCTAGTTACAGGCACTACTCCT
GTCTTGCTATTAGAAAGACTTGCTCTATCTGGCATCTTATGTTTATCGTT
TAAATTTCCCCTGTCCATTTTGTTTCTCTGTGTGTTCTATTGATCCACCG
GTATAATCCATACCCGCTTTTCTTCTTTGT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXTCCAGAAATTCCCTCAGCAATGGAGTATGACTTGAAAATTGG
AAGATGAAACTAACTCTTTACCTGCAAGCAGATAATGGTCATGGTGTGTC
ATCACAGCCATAGAAACCCAACTAAGACATCACCTTAATTTTAAGTGCTA
GAAGTATAAAATACCTGGTAGTTTTACTTCATTTACTATGAGAGCAAATG
TCTCCTTTCTAAATTAACTTTCTATTCATATTGGATAGCTTAGTGGTACT
TTGATATCACTTCAGTTCCATTGACCTACCATAATGTGTTCAGTATTTCA
GGACTTCCTATGGGCTACACAGAGGACTATATATTATCCTCAATAGACAA
GAGCCTTCGACATCCGGAAAATGCAAGGTCAGTAAACAAAGTTTCTGGGT
AGGGGGTAGAAAAATATTTAAAATAAAAGAAAGGGAGGAAGAATAACGGG
GGAGGGAGGAAAAACTTTAATTTGTAAAGAACTATTTTTTGAGATTTATT
TATATTTTCTGTGTATGAGTGTTTTGCATTAACCTATGTCTGTGCACCAC
ATGCGTGCCTGGTGCCCTCAGAGGCCAGAATAGGGTATGTGGTCCCCTGG
TTCTGGGGTTCCTGATGCTTGTCAACCACCTTGTGGATTCTGAGATTCAA
AGTTGCATCTTCTGGAAGAGCAGTCACTGTTCTAAACCACTGACCAATCT
CTCTAN

Query= MSMg01no386_i17.g1 MSMg01no386_i17.g1 CHROMAT_FILE:
MSMg01no386_i17.g1 PHD_FILE: MSMg01no386_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:22 2005
         (688 letters)



>mm_chr5_22808294_22809381
          Length = 1088

 Score = 1017 bits (526), Expect = 0.0
 Identities = 655/708 (92%), Gaps = 22/708 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   attccctcagcaatggagtatgacttgaaaattggaagatgaaactaactctttacctgc 60
           |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 201 attccctcagcaatggagtatgacttgaaaattggaaggtgaaactaaccctttacctgc 260

                                                                       
Query: 61  aagcagataatggtcatggtgtgtcatcacagccatagaaacccaactaagacatcacct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagcagataatggtcatggtgtgtcatcacagccatagaaacccaactaagacatcacct 320

                                                                       
Query: 121 taattttaagtgctagaagtataaaatacctggtagttttacttcatttactatgagagc 180
           ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taagtgtaagtgctagaagtataaaatacctggtagttttacttcatttactatgagagc 380

                                                                       
Query: 181 aaatgtctcctttctaaattaactttctattcatattggatagcttagtggtactttgat 240
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattgtctcctttctaaattaactttctattcatattggatagcttagtggtactttgat 440

                                                                       
Query: 241 atcacttcagttccattgacctaccataatgtgttcagtatttcaggacttcctatgggc 300
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 atcacttcagttccattgacctaccctaatgtgttcagtatttcaggacttcctatgggc 500

                                                                       
Query: 301 tacacagagga--ctatatattatcctcaatagacaagagc-----------cttcga-c 346
           | | ||||| |  | |||||||||  ||||| || ||||||           |||| | |
Sbjct: 501 t-c-cagagaataccatatattatggtcaatggagaagagctttcaaaatatcttccaac 558

                                                                       
Query: 347 atccggaaaatgcaaggtcagtaaacaaagtttctgggtagggggtagaaaaatatttaa 406
           ||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 559 atctggaaaatgcaaggtcagtaaacagagtttctgggtagggggtagagaaatatttaa 618

                                                                       
Query: 407 aataaaagaaagggaggaagaa---taacgggggaggga---ggaaaaactttaatttgt 460
           | ||||||||||||||||||||   |||||||||| |||   | |||||||||||||  |
Sbjct: 619 attaaaagaaagggaggaagaagagtaacgggggaaggaaaagaaaaaactttaattcat 678

                                                                       
Query: 461 aaagaactattttttgagatttatttatattttctgtgtatgagtgttttgcattaacct 520
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 679 aaagaactattttttgagatttatttatattttctgtgtatgagtgttttgcatgaagct 738

                                                                       
Query: 521 atgtctgtgcaccacatgcgtgcctggtgccctcagaggccagaatagggtatgtggtcc 580
           ||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 739 atgtctgtgcaccacatgcatgcctggtgccctcagagggcaggatagggtatgtggtcc 798

                                                                       
Query: 581 cctggttctggggttcctgatgcttgtcaaccaccttgtggattctgagattcaaagttg 640
           |||||||||||||||||| ||| |||||||||||||||||||| |||| |||||||||||
Sbjct: 799 cctggttctggggttcctaatgtttgtcaaccaccttgtggatgctgaaattcaaagttg 858

                                                           
Query: 641 catcttctggaagagcagtcactgttctaaaccactgaccaatctctc 688
           |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 859 catcttctggaagagcagtcactgttcttaaccactgaccaatctctc 906


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space:   730884
Effective search space used:   730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)