CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTGTCAAAATAGAAGTCAGCTGCTTTCTCCAAGGTAGCCCATGCCAGCTG
GCTTAAGAGTGGCATTGGCTCCAGCTGTGTTTGGAAGCCCAATCAGATAC
AGCGGTACTGAACAGAATAAGTACAGAAGTAATAAGGATGGAATGAATTG
AAGAAATAGGATATTGCTAAATATCAAAATAAATTCCAGGCATGATTCAA
CTTAATTGATCTCTTTAGAGACATGGCCAGAGTCAATAGTGTGAAAACAT
TCTTTCAGCTTTTCTGAGAGCTTCTCATTTATTTCATGATTTGGTGTATT
CTAATATTAACAAGTTAGAACAAATGAAGAACAAATTCTTTTGGAATTGG
GGCTCAATTAATTAAAAATTATACTTGAATTTCTCTATTAAAGGTAACAT
ATCCAAGCAAAAGTGTTTTAATGATACATATGCACTCTTTTGAGTAAAAA
AAAATAGGCTTAGTTTAGTGGCTTCGCTCACTTAAAGCCTTTTAACAGAA
TAACAATGTCAACTAAGTGATCCCTCAGAGTTCCCCTGCGATTACGCCAC
CAACCACAGCACACTTCTGGTCCCGCCCATGGCCTTGCTCTACATACGTC
ACCCGAGCCCCGCCCCTCCCTTCTCCGACGAGGCTTTCTGTTCCCGCGTA
GCCCCTGCCCCCCCCCATACCGATCCTCTGTTTTTCCTCGCCCCTATGCA
TTGTGCCGCTCG

NNNCCCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTACCTGAGGAATACTG
AATGGCAGAGAAACACCTGAAATAAATGTTCAACATACTTAATCAGGGAA
ATGCAAATTAAAACAACCTTGAGATTCCACCTCACACCAGTCAGAATGGC
TAAGATGAAAAATTCAGATGACAGCAGATGCTGGTGAGGATGTGGAGAAA
GAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTC
TGGAAATCAGCCTGGCGGTTCCTCAGAATATTGGACATAGTACTACCAGA
GGATCCCACAATACCTCTCCTGGGCATATATCCAGAAGATGTTCCAAGGG
GTAAGAAGGACATATGCTCCACTTCATTCATAGTAGCCTTATTAATAATA
GCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACC
GAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTCTTAAAAAGA
ACGAATCTATGAAATTCCTACCCCAACGGATGGGACTGGAGGGCACCCTC
CCCGAGTGAGGTACCCTCATCTCCCCTGTAACCCCCCCACATGTCCCCCC
TGATACACGTAAATTACCCCATTTATTTGGCACCCCCCCTACATCATCTC
CCCTCTCCTCTCCCCTTGCAATTTCATCATTACTGCCCCTCCTCCG

Query= MSMg01no387_g01.b1 MSMg01no387_g01.b1 CHROMAT_FILE:
MSMg01no387_g01.b1 PHD_FILE: MSMg01no387_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:25 2005
         (461 letters)



>mm_chr5_60907592_60908451
          Length = 860

 Score =  837 bits (433), Expect = 0.0
 Identities = 451/457 (98%), Gaps = 1/457 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtcaaaatagaagtcagctgctttctccaaggtagcccatgccagctggctta 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtcaaaacagaagtcagctgctttctccaaggtagcccatgccagctggctta 264

                                                                       
Query: 65  agagtggcattggctccagctgtgtttggaagcccaatcagatacagcggtactgaacag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agagtggcattggctccagctgtgtttggaagcccaatcagatacagcggtactgaacag 324

                                                                       
Query: 125 aataagtacagaagtaataaggatggaatgaattgaagaaataggatattgctaaatatc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aataagtacagaagtaataaggatggaatgaattgaagaaataggatattgctaaatatc 384

                                                                       
Query: 185 aaaataaattccaggcatgattcaacttaattgatctctttagagacatggccagagtca 244
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaataaatttcaggcatgattcaacttaattgatctctttagagacatggccagagtca 444

                                                                       
Query: 245 atagtgtgaaaacattctttcagcttttctgagagcttctcatttatttcatgatttggt 304
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acagtgtgaaaacattctttcagcttttctgagagcttctcatttatttcatgatttggt 504

                                                                       
Query: 305 gtattctaatattaacaagttagaacaaatgaagaacaaattcttttggaattggggctc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtattctaatattaacaagttagaacaaatgaagaacaaattcttttggaattggggctc 564

                                                                       
Query: 365 aattaattaaaaattatacttgaatttctctattaaaggtaacatatccaagcaaaagtg 424
           |||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 565 aattaattaaaa-ttatacttgaatttctctattaagggtaatatatccaagcaaaagtg 623

                                                
Query: 425 ttttaatgatacatatgcactcttttgagtaaaaaaa 461
           |||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttttaatgatacatatgcactcttttgagtaaaaaaa 660


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 860
Length adjustment: 10
Effective length of query: 451
Effective length of database: 850
Effective search space:   383350
Effective search space used:   383350
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)