Query= MSMg01no390_e10.b1 MSMg01no390_e10.b1 CHROMAT_FILE:
MSMg01no390_e10.b1 PHD_FILE: MSMg01no390_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:08 2005
(249 letters)
>mm_chr5_90698390_90699037
Length = 648
Score = 325 bits (168), Expect = 2e-93
Identities = 180/184 (97%), Gaps = 1/184 (0%)
Strand = Plus / Plus
Query: 1 attttcactagcctgtgtacatgaggaaataatcatcgagaaagaaaaaccagcagaaaa 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 attttcactagcctgtgtacatgaggaaataatcatcgagaacgaaaaaccagcagaaaa 260
Query: 61 gatcaggtataacattgagaatgggaacaaaaggttaggaatagaggcctactagttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 261 gatcaggtataacattgagaatgggaacaaaaggttaggaatagaggactactagttaga 320
Query: 121 gcagaaaaatttacagcatacaagatgaagactcctccatacagagaccaagttggttgg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagaaaaatttacagcatacaagatgaagactcctccatacagagaccaagttggttg- 379
Query: 181 tttt 184
||||
Sbjct: 380 tttt 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 648
Length adjustment: 9
Effective length of query: 240
Effective length of database: 639
Effective search space: 153360
Effective search space used: 153360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no390_e10.g1 MSMg01no390_e10.g1 CHROMAT_FILE:
MSMg01no390_e10.g1 PHD_FILE: MSMg01no390_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:08 2005
(381 letters)
>mm_chr5_90893467_90894247
Length = 781
Score = 698 bits (361), Expect = 0.0
Identities = 376/381 (98%)
Strand = Plus / Minus
Query: 1 aaagcaggtgttgtgtgtgtctttccaggagtttaccttcggggtcaggcagctttcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aaagcaggtgttgtgtgtgtctttccaggagtttaccttcggggtcaggcagctttcctt 522
Query: 61 gtcagcctctgcacaacactgggtcagaatctcattgtactgctcagcatagtaaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gtcagcctctgcacaacactgggtcagaatctcattgtactgctcagcatagtaaagaag 462
Query: 121 ttctggggcatagaaataaggatgtcttctggcaacttcatgcaaatagctgagttatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttctggggcatagaaataaggatgtcttctggcaacttcatgcaaatagctgagttatgg 402
Query: 181 gaaagaagaagaagaaaacaggcagttattccccacagaacagtactacagaaatgatta 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 401 gaaagaagaagaagaaaacaggcagttattccccacagaacaatactacagaaatgatta 342
Query: 241 gaatcaatcctcacccttggatacacatgggatttgtaattgaccggtttcactcagtgt 300
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gaatcaacccacacccttggatacacatgggatttgtaattgaccggtttcactcagtgt 282
Query: 301 ggtcacccatgagtgatggactttgtctgttgttaagtgagcaaagagagatatgtagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ggtcacccatgagtgatggactttgtctgttgttaagtgagcaaagagagatatgtagat 222
Query: 361 gtgtgtgtgtgtgtgtatgtg 381
||||||||||||||| ||||
Sbjct: 221 atgtgtgtgtgtgtgtgtgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
