MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-393A16
Chromosome	5 (Build37)
Map Location	149,901,381 - 149,901,857
singlet/doublet	singlet
Overlap gene	none
Upstream gene	C130038G02Rik, LOC100041819, Slc7a1, LOC100041842, Ubl3, 2210417A02Rik, LOC100041869, Katnal1, 8430423G03Rik, 1810059H22Rik, LOC667386, LOC100039964, Hmgb1
Downstream gene	EG667410, LOC100040006, Uspl1, 2310047D07Rik, Alox5ap, 6330406I15Rik, 4930588N13Rik, LOC100040037, LOC100040062, 4930434E21Rik, Hsp110, EG433968, B3galtl, LOC100040089, Rxfp2
Link	Open Mouse BAC browser

Click to get alignment info.

name	C130038G02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77521 MGI:1915388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041819 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041819
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 10 Proteins pseudo : _no_value

name	Slc7a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11987 MGI:88117
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041842 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041842
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Ubl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24109 MGI:1344373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2210417A02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70138 MGI:1917388
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100041869 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041869
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Katnal1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231912 MGI:2387638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	8430423G03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71473 MGI:1918723
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	1810059H22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69820 MGI:1917070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs

name	LOC667386 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100039964 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Hmgb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15289 MGI:96113
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667410 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667410 MGI:3647532
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 296 ESTs, 9 Proteins

name	LOC100040006 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040006
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Uspl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231915 MGI:2442342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310047D07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69657 MGI:1916907
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Alox5ap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11690 MGI:107505
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6330406I15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70717 MGI:1917967
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930588N13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75860 MGI:1923110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 2 Proteins

name	LOC100040037 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040037
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100040062 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040062
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	4930434E21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381693 MGI:1923042
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hsp110 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15505 MGI:105053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433968 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433968 MGI:3648428
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 521 ESTs, 19 Proteins

name	B3galtl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381694 MGI:2685903
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040089 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Rxfp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140498 MGI:2153463
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C130038G02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362771 GeneID:77521 MGI:1915388
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C130038G02 gene transcript_id : NM_029920.5

name	Slc7a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801995 GeneID:11987 MGI:88117
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 transcript_id : NM_007513.3

name	LOC100041842 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254777 GeneID:100041842
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100041842 transcript_id : XM_001477382.1

name	Ubl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053909 GeneID:24109 MGI:1344373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-like 3 transcript_id : NM_011908.2

name	2210417A02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254779 GeneID:70138 MGI:1917388
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 2210417A02 gene transcript_id : XM_001477439.1

name	LOC100041869 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254781 GeneID:100041869
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041869 transcript_id : XM_001477450.1

name	Katnal1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956363 GeneID:231912 MGI:2387638
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : katanin p60 subunit A-like 1 transcript_id : NM_153572.1

name	8430423G03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375855 GeneID:71473 MGI:1918723
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 8430423G03 gene transcript_id : XM_990235.1

name	LOC667386 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94375857 GeneID:667386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical LOC667386 transcript_id : XM_990264.1

name	LOC100039964 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254749 GeneID:100039964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100039964 transcript_id : XM_001473858.1

name	Hmgb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326547 GeneID:15289 MGI:96113
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group box 1 transcript_id : NM_010439.3

name	EG667410 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375861 GeneID:667410 MGI:3647532
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 296 ESTs, 9 Proteins product : predicted gene, EG667410 transcript_id : XM_990406.1

name	LOC100040006 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254751 GeneID:100040006
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040006 transcript_id : XM_001473934.1

name	Uspl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701435 GeneID:231915 MGI:2442342
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase like 1 transcript_id : NM_001013378.1

name	2310047D07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375863 GeneID:69657 MGI:1916907
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : RIKEN cDNA 2310047D07 gene transcript_id : XM_990491.1

name	Alox5ap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33563241 GeneID:11690 MGI:107505
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arachidonate 5-lipoxygenase activating protein transcript_id : NM_009663.1

name	6330406I15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363148 GeneID:70717 MGI:1917967
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6330406I15 gene transcript_id : NM_027519.2

name	4930588N13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375866 GeneID:75860 MGI:1923110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 2 Proteins product : RIKEN cDNA 4930588N13 gene, transcript variant 1 transcript_id : XM_132524.6

name	4930434E21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119508423 GeneID:381693 MGI:1923042
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930434E21 gene transcript_id : NM_029440.3

name	Hsp110 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145504 GeneID:15505 MGI:105053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 110 transcript_id : NM_013559.2

name	EG433968 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254784 GeneID:433968 MGI:3648428
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 521 ESTs, 19 Proteins product : predicted gene, EG433968 transcript_id : XM_485703.4

name	B3galtl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487080 GeneID:381694 MGI:2685903
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta 1,3-galactosyltransferase-like transcript_id : NM_001081204.1

name	LOC100040089 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254785 GeneID:100040089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100040089 transcript_id : XM_001474065.1

name	Rxfp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17978287 GeneID:140498 MGI:2153463
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : relaxin/insulin-like family peptide receptor 2 transcript_id : NM_080468.1

name	C130038G02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75832043 CCDS:CCDS19881.1 GeneID:77521 MGI:1915388
definition	codon_start : 1 note : isoform b is encoded by transcript variant 2 product : hypothetical protein LOC77521 isoform b protein_id : NP_084196.4

name	Slc7a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677433 CCDS:CCDS19882.1 GeneID:11987 MGI:88117
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015359 - amino acid permease activity [Evidence IEA]; GO:0015171 - amino acid transporter activity [Evidence IEA]; GO:0005279 - amino acid-polyamine transporter activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006865 - amino acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cationic amino acid transporter 1 product : solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 protein_id : NP_031539.2

name	LOC100041842 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254778 GeneID:100041842
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477432.1

name	Ubl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755925 GeneID:24109 MGI:1344373
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006464 - protein modification [Evidence IEA] codon_start : 1 product : ubiquitin-like 3 protein_id : NP_036038.1

name	2210417A02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254780 GeneID:70138 MGI:1917388
definition	codon_start : 1 product : hypothetical protein LOC70138 protein_id : XP_001477489.1

name	LOC100041869 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254782 GeneID:100041869
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477500.1

name	Katnal1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956364 GeneID:231912 MGI:2387638
definition	GO_component : GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008568 - microtubule-severing ATPase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : katanin p60 subunit A-like 1 protein_id : NP_705800.1

name	8430423G03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375856 GeneID:71473 MGI:1918723
definition	codon_start : 1 product : hypothetical protein LOC71473 protein_id : XP_995329.1

name	LOC667386 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94375858 GeneID:667386
definition	codon_start : 1 product : hypothetical protein protein_id : XP_995358.1

name	LOC100039964 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254750 GeneID:100039964
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473908.1

name	Hmgb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754208 CCDS:CCDS19883.1 GeneID:15289 MGI:96113
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005694 - chromosome [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0005634 - nucleus [Evidence TAS] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0030235 - nitric-oxide synthase regulator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006323 - DNA packaging [Evidence IEA]; GO:0006809 - nitric oxide biosynthesis [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006810 - transport [Evidence IDA] codon_start : 1 note : high mobility group protein 1 product : high mobility group box 1 protein_id : NP_034569.1

name	EG667410 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375862 GeneID:667410 MGI:3647532
definition	codon_start : 1 product : similar to mKIAA0060 protein protein_id : XP_995500.1

name	LOC100040006 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254752 GeneID:100040006
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473984.1

name	Uspl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701436 GeneID:231915 MGI:2442342
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ubiquitin specific peptidase like 1 protein_id : NP_001013396.1

name	2310047D07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375864 GeneID:69657 MGI:1916907
definition	codon_start : 1 product : hypothetical protein LOC69657 protein_id : XP_995585.1

name	Alox5ap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563242 GeneID:11690 MGI:107505
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0019370 - leukotriene biosynthesis [Evidence IEA] codon_start : 1 note : arachidonate 5 lipoxygenase activating protein product : arachidonate 5-lipoxygenase activating protein protein_id : NP_033793.1

name	6330406I15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734078 CCDS:CCDS19884.1 GeneID:70717 MGI:1917967
definition	codon_start : 1 product : hypothetical protein LOC70717 protein_id : NP_081795.1

name	4930588N13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51711287 GeneID:75860 MGI:1923110
definition	codon_start : 1 product : hypothetical protein LOC75860 isoform 1 protein_id : XP_132524.3

name	4930434E21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119508424 GeneID:381693 MGI:1923042
definition	codon_start : 1 product : hypothetical protein LOC381693 protein_id : NP_083716.2

name	Hsp110 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114145505 CCDS:CCDS19885.1 GeneID:15505 MGI:105053
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IDA] GO_process : GO:0051085 - chaperone cofactor-dependent protein folding [Evidence IDA]; GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : heat shock protein, 105 kDa; HSP105 42 C-HSP product : heat shock protein 105 protein_id : NP_038587.2

name	EG433968 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82900057 GeneID:433968 MGI:3648428
definition	codon_start : 1 product : similar to nucleoside diphosphate kinase B protein_id : XP_485703.2

name	B3galtl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487081 GeneID:381694 MGI:2685903
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 product : beta 1,3-galactosyltransferase-like protein_id : NP_001074673.1

name	LOC100040089 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254786 GeneID:100040089
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474115.1

name	Rxfp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17978288 CCDS:CCDS19886.1 GeneID:140498 MGI:2153463
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0016500 - protein-hormone receptor activity [Evidence IMP]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence IMP]; GO:0008584 - male gonad development [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : G protein coupled receptor affecting testicular descent; G protein-coupled receptor 106 product : leucine-rich repeat-containing G protein-coupled receptor 8 protein_id : NP_536716.1

name	LOC100040037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040037
definition	number : 3 pseudo : _no_value

name	LOC100040037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040037
definition	number : 2 pseudo : _no_value

name	LOC100040037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040037
definition	number : 1 pseudo : _no_value

name	LOC100040062 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040062
definition	number : 1 pseudo : _no_value

name	LOC100041819 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254776 GeneID:100041819
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 10 Proteins product : similar to fus-like protein pseudo : _no_value transcript_id : XR_033181.1

name	1810059H22Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149254748 GeneID:69820 MGI:1917070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs product : RIKEN cDNA 1810059H22 gene transcript_id : XR_035221.1

clone name	MSMg01-347G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294F02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-526M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501I20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-516A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325I08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-516A14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-159M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285J17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-393A16.T7 (MSMg01no393_a16.b1)	MSMg01-393A16.TJ (MSMg01no393_a16.g1)
ACC	AG494434	AG494435
length	781	825
length of high quality (start - end)	481 (33 - 513)	39 (752 - 790)
definition	CHROMAT_FILE: MSMg01no393_a16.b1 PHD_FILE: MSMg01no393_a16.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:37:48 2005	CHROMAT_FILE: MSMg01no393_a16.g1 PHD_FILE: MSMg01no393_a16.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:37:48 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACTTAAAC AAACACAAACAAAACCAAACCAGAGTAAACTGTGCCCCAGCCACAGTGAC TGCCTTAAGTTGAATTTTAAATGCATCTGCCAATAATCTGAAGTACTCTT GAGGACTTCATTGAGACCCAGGAATAAGATAAAGGAATGGATAGCTCAAG GACCACAGGCTAAGTGGAAAATCACCAGCAACATAAACGCTAAGAGTCTT GGCCAAGATACTCACTTGACGCAAAATACATGTATGGAAACTTGATCTCA GAGGTATTTTGGTATCCCAGCATTTGCATGGCTTAGAAGTTTCTAACCCA GGGCTGAAACCATCTGCAAATATCAGATAGTTAGAGGGCTTGTCATGGTC TCCAAAATGTTCGCAAGCCCTTGCTTTAAAGGAAAGCCAAGGTTAAAATA GAGATGTTTTATGGCTAGTAAAGAAGGTTGAATGGGCAAAAGAGCCTGCT GTGCCGACCAGAAGACATGAGTTTGATCCCTGGATTCCATGGTGGAAGGA GTAAGAGGTGACCCTCAAAACTAACCTCTGAGTTGGGCCTTGTGNCGCAT GGCTTTAATCCCCGCACCCCCGAGGTCGAAGAAGTCGATTTTTATTTGGG CCCCCCCTAAATAAAAAAGAAGGTTCCAGGACACCCCAGTTTTCTAAAAA GATTTTTTGCCCCCCCCTCACAGGAAAGAATATATATCACGAGTTCTCGT CCCCCCCCAAGGCCGGGCCTGCTTTTTCCCC	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXCTCCTGGTAAATAAATGTCCTTTGACACATTGTACAGTG CAGAATAGCAGCCACCTAGGCTGGGGTGAATGGATGGATGGGTGAATGGA TAGATGNNNNNNNNTNNNNNNTNNTNNTNNNNNNNCCCNNNNNNNNNNNN NNNCCCNNNTTCTCCTCCCTCTCCCCCCCCCCCCCCCCCCCCCCCTCCCC CCCTCCCCCTCCCCCCCCCCCCCCCCCTCCCCTTCTCCCTCCTTCCCCCC CCCCCCCCCTCTCCCTTCCCTCCTTCCCCCCCCCCTCTCCCTCCCCCCCC CCTCCCCCCCCCCTCCCCTCCCCCCCCCCCTCCCCCCCTCCCCCTCCCTT NTCCCCTTTTCTCCCCCCCCCCCCCCCCCCCTCCTTCTCTCCTTCCCCCC CCCCCTCCCCCTTTTCTCCTCCTCCCCTCCTTTCCTCCCCCCCTCCCCCC CCCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCTCCCCTCTTCT CCCCCTCCTCTCCCCTCCCCCCCCTCTCCCCTCCCCCCTCCCCCCCCCCC CCTTCCCCCCCCCCCCCCCCCTCCCCCCCCTCCCTCCCCCCCCCCCCCCC CCTCCCCCCCCCCCCTTCCCCCCCCTCCCCCCTCTCCCCTCCCCTCCCCT TTTCCTCCCTCCCCCCCCTCCCCCCCCCCCTCCCCCTTCCCCCTTCCCTC CCCCCCCCCCCCCCCCCCCCCCTCCCCTTCCCCCCCCCCCTCTCCCCCCC TTTCCCCCCCCTCCCCCCCCCTCCG
quality values	Open. Hide. 12 12 12 19 10 10 10 15 19 37 37 39 22 13 9 9 12 24 25 28 12 12 11 12 15 25 32 33 33 23 24 24 37 43 59 59 47 47 40 50 50 50 42 42 47 57 57 42 42 41 41 41 41 48 48 50 50 43 43 43 43 43 50 48 54 54 57 57 57 50 50 50 50 51 57 68 68 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 57 57 57 57 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 57 59 57 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 50 50 50 50 50 68 68 68 68 57 57 57 57 57 57 57 57 57 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 57 57 57 57 62 62 62 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 59 59 59 68 68 68 68 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 59 68 68 68 68 68 68 68 57 57 59 59 57 57 57 68 68 68 59 59 57 57 59 57 59 57 57 57 68 57 57 59 59 59 59 57 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 59 59 59 68 68 68 68 57 57 59 59 59 59 59 59 59 59 57 59 59 57 57 57 59 59 48 48 48 46 41 41 47 41 41 41 37 37 43 59 59 59 59 39 39 39 37 39 44 59 59 59 37 37 32 29 29 37 39 39 37 41 39 39 37 39 34 39 41 59 41 41 30 30 24 20 20 30 34 41 40 34 31 37 36 39 39 39 36 39 39 41 37 35 35 32 32 32 39 36 11 9 9 9 9 14 13 26 39 32 27 23 22 19 19 24 37 34 34 23 23 23 23 23 37 34 28 24 20 15 15 12 12 11 13 13 25 22 22 23 22 19 27 20 19 19 15 20 11 9 9 9 9 9 9 18 14 9 8 8 8 8 8 11 8 9 8 9 18 12 10 11 11 10 8 8 8 8 8 10 8 10 8 8 10 8 9 14 8 8 8 10 10 12 10 10 10 10 17 9 8 8 8 10 9 8 9 8 8 6 7 7 3 0 3 11 11 9 8 8 10 8 8 10 10 8 8 8 9 13 8 6 6 6 8 8 12 11 10 10 10 10 13 6 6 8 6 10 10 10 10 9 8 8 8 8 8 9 11 15 15 10 10 8 8 8 8 10 16 13 14 20 14 14 11 9 10 11 15 15 10 10 11 10 8 8 9 9 12 13 7 7 6 6 6 6 8 8 8 11 9 10 9 9 8 8 8 9 9 8 8 8 8 8 8 9 10 9 9 9 9 9 9 10 10 10 11 11 11 13 11 11 10 8 6 8 6 6 6 8 6 6 6 6 8 8 8 8 10 8 8 8 8 9 10 8 8 8 6 8 6 6 8 8 10 10 10 10 16 11 11 10 10 11 10 12 11 11 11 11 16 11 11 8 8 8 8 8 8 6 6 8 8 9 15 19 15 14 14 14	Open. Hide. 10 10 23 16 37 39 44 43 37 37 34 30 23 17 21 23 12 11 10 9 12 8 8 8 9 9 14 20 21 19 32 37 37 37 21 15 9 9 9 11 11 25 25 44 43 43 32 17 10 8 7 7 7 10 9 11 22 12 12 18 21 25 25 16 16 11 11 27 27 37 42 50 42 41 33 32 30 11 9 8 8 8 17 22 27 26 26 24 21 14 14 14 31 23 27 14 14 14 23 25 31 31 39 39 37 37 37 32 27 25 30 30 21 14 9 9 9 9 21 27 11 11 9 24 27 48 53 53 53 53 34 25 16 11 12 11 22 17 22 12 11 9 9 11 18 17 17 9 9 9 9 9 9 9 11 3 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 3 0 0 3 0 0 3 0 0 0 0 0 0 0 3 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 3 0 0 0 3 8 6 6 6 8 8 8 17 10 8 8 8 7 9 10 8 8 8 8 17 13 29 29 13 17 11 9 9 9 11 14 22 18 18 9 9 9 15 11 14 19 17 8 8 8 12 19 13 8 8 10 19 21 22 13 10 10 11 13 16 22 13 12 12 10 17 10 9 9 17 22 16 14 15 9 10 8 8 10 10 10 12 11 9 8 15 8 8 8 10 10 10 15 11 10 12 13 10 13 15 9 9 10 10 10 13 13 15 15 11 11 10 14 15 15 19 27 32 33 30 28 21 12 12 7 7 8 8 9 13 9 14 9 12 9 11 14 15 28 15 10 6 6 8 8 10 14 11 12 11 8 8 8 11 9 14 10 14 9 9 10 10 10 9 8 11 10 8 8 8 9 12 9 12 15 15 15 8 8 8 10 9 9 9 9 9 11 11 12 3 0 3 10 13 13 8 10 8 8 8 8 9 9 16 9 9 12 23 22 33 33 33 37 37 24 22 19 19 8 9 9 7 7 7 9 8 13 6 6 6 8 8 8 9 8 9 11 16 20 22 22 19 18 11 10 10 11 20 12 11 6 6 6 8 10 10 11 13 14 10 10 10 16 11 15 10 6 6 8 8 17 7 9 9 10 13 28 30 37 37 28 22 19 10 8 13 9 9 9 19 16 21 30 17 16 10 10 8 9 9 9 23 27 23 23 12 14 14 15 14 12 12 19 19 19 13 10 10 15 15 11 10 10 8 8 8 15 15 21 24 28 24 25 20 15 18 9 8 8 8 8 12 11 16 10 10 9 9 9 9 12 10 19 19 10 10 11 16 15 14 10 13 10 10 10 9 9 10 15 15 20 17 13 16 24 19 19 8 8 8 17 21 23 15 15 13 13 16 22 22 17 8 8 8 8 8 8 27 23 16 11 11 19 19 22 11 9 8 8 8 8 8 8 9 8 8 15 10 10 9 10 10 21 19 24 16 10 10 20 26 32 37 33 33 37 19 16 10 10 9 10 10 10 11 11 16 16 10 10 10 13 13 15 19 11 11 11 8 15 12 14 19 22 26 15 19 16 13 22 16 13 8 8 8 10 8 13 15 8 10 10 19 19 16 12 11 9 11 9 10 23 23 10 13 9 14 11 21 9 9 9 17 18 18 20 10 10 9 8 13 9 10 16 19 23 23 28 18 17 15 12 24 30 10 10 9 9 14 15 23 24 30 23 20 11 11 9 13 9 9 9 19 18 28 28 33 33 25 37 37 37 32 37 41 37 37 39 41 40 26 17 10 9 9 10 15 10 21 10 10 17 17 28 28 28 30 24 21 12 10 21 8 8 8 13 13 10 9 10 8 8 8 8 8 13 15 14 22 20 20 22 22 16 17 13 21 18 10 9 15 12 10 13 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no393_a16.b1 MSMg01no393_a16.b1 CHROMAT_FILE:
MSMg01no393_a16.b1 PHD_FILE: MSMg01no393_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:48 2005
         (481 letters)



>mm_chr5_149901177_149902057
          Length = 881

 Score =  884 bits (457), Expect = 0.0
 Identities = 472/477 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacttaaacaaacacaaacaaaaccaaaccagagtaaactgtgccccagccacag 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttaaacaaacacaaacaaaaccaaaccagagtaaactgtgccccagccacag 264

                                                                       
Query: 65  tgactgccttaagttgaattttaaatgcatctgccaataatctgaagtactcttgaggac 124
           |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 265 tgactggcttaagttgaattttaaatgcatctgccaataatctgaagtgctcttgaggac 324

                                                                       
Query: 125 ttcattgagacccaggaataagataaaggaatggatagctcaaggaccacaggctaagtg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcattgagacccaggaataagataaaggaatggatagctcaaggaccacaggctaagtg 384

                                                                       
Query: 185 gaaaatcaccagcaacataaacgctaagagtcttggccaagatactcacttgacgcaaaa 244
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 385 gaaaatcaccagcaacataaacgctaagagtcttggccaagatactcacttgacacgaaa 444

                                                                       
Query: 245 tacatgtatggaaacttgatctcagaggtattttggtatcccagcatttgcatggcttag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tacatgtatggaaacttgatctcagaggtattttggtatcccagcatttgcatggcttag 504

                                                                       
Query: 305 aagtttctaacccagggctgaaaccatctgcaaatatcagatagttagagggcttgtcat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagtttctaacccagggctgaaaccatctgcaaatatcagatagttagagggcttgtcat 564

                                                                       
Query: 365 ggtctccaaaatgttcgcaagcccttgctttaaaggaaagccaaggttaaaatagagatg 424
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggtctccaaaatgtttgcaagcccttgctttaaaggaaagccaaggttaaaatagagatg 624

                                                                    
Query: 425 ttttatggctagtaaagaaggttgaatgggcaaaagagcctgctgtgccgaccagaa 481
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttttatggctagtaaagaaggttgaatgggcaaaagagcctgctgtgccgaccagaa 681


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space:   410241
Effective search space used:   410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information