Query= MSMg01no393_c10.b1 MSMg01no393_c10.b1 CHROMAT_FILE:
MSMg01no393_c10.b1 PHD_FILE: MSMg01no393_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:57 2005
(344 letters)
>mm_chr6_46901741_46902488
Length = 748
Score = 408 bits (211), Expect = e-118
Identities = 323/393 (82%), Gaps = 53/393 (13%)
Strand = Plus / Minus
Query: 5 gaattcagactggattacaagttacagagtgtaacagatcctgtcgcacagcaaagcaaa 64
|||||||||||||| || ||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 745 gaattcagactggagtataagttacagagtgtaaccgatcctgtcacagagcaaagcaaa 686
Query: 65 gcaaagcaaagcaaagcaaagcaaagcaaagcaaagcaaagcaaag-------------- 110
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcaaagcaaagcaaagcaaagcaaagcaaagcaaagcaaagcaaagcaaacctaaccaaa 626
Query: 111 -caaagcaaagcaaagcaaagcaaagcaaagca----aag-------------------- 145
|||| |||| |||| |||| |||| |||| || |||
Sbjct: 625 ccaaaccaaaccaaaccaaaccaaaccaaaccaaaccaagccaaaccaaaccaaaccaaa 566
Query: 146 ----------caaaacacaaaacagactgatgaagtattctgaacatttcattcatgtat 195
|||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 565 caaaacacaacaaaacacaaaacagactgatgaattattctgagcatttcattcatgtat 506
Query: 196 tagatgaatatgtatagactttatttccatgttcataccctatcaattttaatcaaattt 255
|||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 505 tagacgaatatgtatagtctttatttccatgttcacaccctatcaattttaatcaaattt 446
Query: 256 attagtcatgtatttgaaaaccttgattttttt----gggggggaagggtggtttaaatg 311
|||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 445 attaatcatgtatttgaaaaccttgattttttttggggggggggaagggtggtttaaatg 386
Query: 312 gttagttctgaaagcagtattacaattcccttc 344
|||||||||||||||||||||||||||||||||
Sbjct: 385 gttagttctgaaagcagtattacaattcccttc 353
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 23
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 748
Length adjustment: 9
Effective length of query: 335
Effective length of database: 739
Effective search space: 247565
Effective search space used: 247565
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_c10.g1 MSMg01no393_c10.g1 CHROMAT_FILE:
MSMg01no393_c10.g1 PHD_FILE: MSMg01no393_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:58 2005
(550 letters)
>mm_chr5_39490874_39491823
Length = 950
Score = 955 bits (494), Expect = 0.0
Identities = 500/502 (99%)
Strand = Plus / Minus
Query: 1 agatcatttgatgtgccgtctgacacaatcgctagagtgttgggaaaaagcgggtgcaag 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 502 agatcatttgatgtgccgtctgacacaatcgctagagtgttgggagaaagcgggtgcaag 443
Query: 61 ctccaaactacacatgaataatttaagcagcatagaagataatgtaccacagccgtgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctccaaactacacatgaataatttaagcagcatagaagataatgtaccacagccgtgaag 383
Query: 121 ccggtaagcgacccggccaggattcaaattcaggacacttctactttaaaattcctatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ccggtaagcgacccggccaggattcaaattcaggacacttctactttaaaattcctatac 323
Query: 181 ttggcactcaatttctggctggaatgtcaatacacagagctacccagagaccatgcagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttggcactcaatttctggctggaatgtcaatacacagagctacccagagaccatgcagat 263
Query: 241 gaaattgttagccggcgccttcagttgttcctacttctgctgccaattattatgagtgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gaaattgttagccggcgccttcagttgttcctacttctgctgccaattattatgagtgag 203
Query: 301 agagacatttactctctcagagtatggaggtcagaaatcccaagtgggtcacaggatcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 agagacatttactctctcagagtatggaggtcagaaatcccaagtgggtcacaggatcag 143
Query: 361 gctccttctgaagtctccaggcactaagctatgtccatgacttgaccaacttctataagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gctccttctgaagtctccaggcactaagctatgtccatgacttgaccaacttctataagc 83
Query: 421 catttctgctgcctagcacacagtccccatcgactccctcttcagtacttgtcactccag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 catttctgctgcctagcacacagtccccatcgactccctcttcagtacttgtcactccag 23
Query: 481 cctttgcttctgcctctgcatc 502
||| ||||||||||||||||||
Sbjct: 22 cctctgcttctgcctctgcatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
