XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTTGTTTATCTCTGTGCCCCATGTTTTAATAGGGTTATTTGATTTTTTGG
AGTCTATCTTCTTGAGTTCTTTATATATAGTGGATATTAGTCCCCTATCT
CATTTAGGATTGGTAAAGATCCTTTCCCAATCTGTTGATGGCCTTTTTGT
TTTGTTGATGGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTATGAGGT
CCCATTTGTTGATTCTTGATCTTACAGCACAAGCCATTGCTGTTCTGTTC
AGGATTTTTTCCCCTGTATCAATATCTTTGAGGTTTTTCCCCACTTTTTC
CTCTATAAGTTTCAGGGTCTCTGGTTTTATGTGCAGTTCCTTGATCCACA
TAGATTTGACCTTAGTACAAAGAGGTAAGAATTGATCAATTTGCACTCTT
GTACATGATAACTGCCAGTTGTGCTAGCACCATTTGTTGAAAATGCTGTC
TCTTTTCCACTGGATAGTGCCAGCTCCCTTTGTAAAGTCAGGCGACCATA
GTGTGGGTGTTCCTTTTCCGGTCCTTCAATTCTATTCCATGGAATTACCT
GTCTCGGACTTGGCCCACACCCTTGGGGGTTTTTATAAAATTGTTTTGGT
TTAACACCTTTGAATTATCTCTTGGGTGTGTCCTCCTAATGTGTCTTTTT
TTTCTATGACCCACAATTTGTGTTTCCCTCCTGTTTTTTTTTTTTTCCTC
TATTTACCATCTTTCATTTCTTTTTCTTATTTTTGAATG

ATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGAACTGTAAGATAGATAAACAAGTAA
AGAGATGGTAAAATAGATAGACCAATTTAAAATATTGAAGAAGTTTCCTA
ACCTCAAAGTTGAGAATATTTTATGTCTGTTCTTGAACCATAGGTTTTGA
AGAAGTATAATGAATACTCTTGTAAGCACAGTAGTTATATAGTTTGACAA
AAGAACAAGTTGTCAGGTTGCCTGCAATTTAAGGTCATGTACATGTCAAG
TGCATTTAAGAAAACAAGTGTGCCAGAATGAAGGAATATTTCCTGGTGTT
AAACACTGTAATTTGAGAGTTGATTAGTGTTATCAACATGGACCATAAAG
ATAATGACTTCTAAGCTGCCATCTAAGACTAGGTGTGAGGAGAGTTATAA
CGTTGGTAAGCAAAATTATGATGGGGCAAAGTGTCCACACTTTGGTCTTC
ATTCTTCTTGAGTTTGATGTGTTTTGCAAATTGTAACTTATATATTGGGG
TATTCTAAGTATCTGGGCTAATATCTACTTATCAGTGAGTACTTATCATT
TGAGTAATTTTGGGAATGGGGTTACCTCACTCACAATAATGGTTTTCAGG
GCCCAACCACTTGGCCTAGGAGTTTCTAAAATTTATTTCTTTTTTATAAA
GGGAGAGAACTCCTCTTGGGGAATGGGAACACCTTTTTTGTACCACTCCC
CCCGGTGAAGGGGACCTGGGTTCTCTTCCTCCTT

Query= MSMg01no393_p23.g1 MSMg01no393_p23.g1 CHROMAT_FILE:
MSMg01no393_p23.g1 PHD_FILE: MSMg01no393_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:12 2005
         (440 letters)



>mm_chr5_84895987_84896826
          Length = 840

 Score =  828 bits (428), Expect = 0.0
 Identities = 437/440 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaactgtaagatagataaacaagtaaagagatggtaaaatagatagaccaatttaaaat 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 agaactgtaagatagataaacaagtaaagagatggtaaaatagatagaccgatttaaaat 260

                                                                       
Query: 61  attgaagaagtttcctaacctcaaagttgagaatattttatgtctgttcttgaaccatag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgaagaagtttcctaacctcaaagttgagaatattttatgtctgttcttgaaccatag 320

                                                                       
Query: 121 gttttgaagaagtataatgaatactcttgtaagcacagtagttatatagtttgacaaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttttgaagaagtataatgaatactcttgtaagcacagtagttatatagtttgacaaaag 380

                                                                       
Query: 181 aacaagttgtcaggttgcctgcaatttaaggtcatgtacatgtcaagtgcatttaagaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacaagttgtcaggttgcctgcaatttaaggtcatgtacatgtcaagtgcatttaagaaa 440

                                                                       
Query: 241 acaagtgtgccagaatgaaggaatatttcctggtgttaaacactgtaatttgagagttga 300
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 acaagtgtgccagaatgaaggaatatttgctggtgttaaacactgtaatttgagagttga 500

                                                                       
Query: 301 ttagtgttatcaacatggaccataaagataatgacttctaagctgccatctaagactagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttagtgttatcaacatggaccataaagataatgacttctaagctgccatctaagactagg 560

                                                                       
Query: 361 tgtgaggagagttataacgttggtaagcaaaattatgatggggcaaagtgtccacacttt 420
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtgaggagagttataacattggtaagcaaaattatgatggggcaaagtgtccacacttt 620

                               
Query: 421 ggtcttcattcttcttgagt 440
           ||||||||||||||||||||
Sbjct: 621 ggtcttcattcttcttgagt 640


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space:   358161
Effective search space used:   358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)