XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGAATTCA
ACCTAGTTCCCTGAACATTTTAGACAAACACATTAAAAACACAGGGTCTT
GTTAAATATTTCAAACAGCCTTAAACTCTATTTCTCAGCAGGGCTTGAAC
TTGAAATCACACTACCTCATCCCCCTGAGCAGCTGAGATTACAGACCTAC
TTTGAGTACCTCGAAACTAAGCTATCTTCAAAACTATTTTCACCTGTTCC
TTACATGGCCGACAAACATTTTGGTAAGTTACAGTGTAGCTTTCCCACAA
TCCCCTGGTCTGCTGTCCACATCTTTACTTCTCTCTATTTTGCCCATCTT
TTCATTATCTTCTCCTTTTAGCTAAAATGCAATCATTAACAGACTAAAAA
CCGTACTGATAAAACTTTCAACCCTTGATTAGTTGGAATGAATTGAGACG
TTTCTAGCTAAAACAATTATTTTCTTATTCAGAAGTGGNTGTGTGTATTA
CTCCTTTTTAATAAGTAAAAACGATGTGTTAAAAATGAACCAATCAATCT
CACATTGTCTTGTGTGGCATTTTTCTATATACTACTACTGGCTTTTGGGT
AAATGCCCCCCCCCCATTCTCATTATTTTTGAAAGAAAATTGGATGGTAA
GGGGGAGTGGAAATGTTTTGGAAAAAAAAAACAAAAACAATAACCTCCTC
TCTCTTTTCTTTTTCTTTTTTCCCCCTCTCTCTTTTCCTCNCCCCCCCCC
CTANTTGACTTTCGTTCCACGCCTTCCTCCACTG

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTCTGCAGTGTTGAAAAATTAAAAAAAAAAGG
AAAAATATGTGTGATTGCTCTCTCCTAAGAATCAGGAGGCTGGGGTCATG
GAATGCTAATTCACAGGATAACCAAATGGGAACTTAGAGTAAATTGAGAT
CTCCAGAAAAAGTGAGAGGGATGAAATAGGCTGATTCCATGACAGGCTTC
AAATTGGAAGTTAAGGAAACTAGACCTAAATTTCTGTTTGCAAGAACTTC
ACAAGTCCAGGCAAGTCCAGGCAAGCCCAGGCAAGCCCAGGCAAGACAGT
TACTGGGAAAAACAAAAACAAAAACAAAAACAAAAACAAAAACAAAAACA
AAAACAAAAACAAAAACAAAAACAAAAACAAAAACAAAAACTAAAACAAA
CAAACAAAACAGGCTTCAGGCAGCTGATCAGATGACATCTGGCCTGAGAC
AAAGAAAATGAGTAAGCAGCAGTTTTCAAACTTCCTCAGAAATACTTTCC
AGACTTCTCCAGCAACAGTTTCCAGCCCCACACCCTGATAAAGGTCCTGG
AAATTCCCTATAAAATGGACCTCATCTAATTAAGTTAAAGGGCACCTACC
CCGGAATTTCCCTCATGGGGCTTTAAATTGGATCCGAAAAATTTATTCTC
AGGGTTCTCTCAACCCTGGTATGGAAAAAACCACCCCCGCCCCGCTTTCT
TTGACTTTTAAACACCCCCCCCTCTTGTCACATTCCTATAN

Query= MSMg01no397_o15.b1 MSMg01no397_o15.b1 CHROMAT_FILE:
MSMg01no397_o15.b1 PHD_FILE: MSMg01no397_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:30 2005
         (444 letters)



>mm_chr5_69795647_69796490
          Length = 844

 Score =  810 bits (419), Expect = 0.0
 Identities = 434/439 (98%)
 Strand = Plus / Minus

                                                                       
Query: 6   ggaattcaacctagttccctgaacattttagacaaacacattaaaaacacagggtcttgt 65
           |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ggaattcaacctaggtccttgaacattttagacaaacacattaaaaacacagggtcttgt 739

                                                                       
Query: 66  taaatatttcaaacagccttaaactctatttctcagcagggcttgaacttgaaatcacac 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 taaatatttcaaacagccttaaactctatttctcagcagggcttgaacttgaaatcacac 679

                                                                       
Query: 126 tacctcatccccctgagcagctgagattacagacctactttgagtacctcgaaactaagc 185
           ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 678 tacctcatccccctgagcagctgagattacagacctactttgagtaccttgatactaagc 619

                                                                       
Query: 186 tatcttcaaaactattttcacctgttccttacatggccgacaaacattttggtaagttac 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tatcttcaaaactattttcacctgttccttacatggccgacaaacattttggtaagttac 559

                                                                       
Query: 246 agtgtagctttcccacaatcccctggtctgctgtccacatctttacttctctctattttg 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agtgtagctttcccacaatcccctggtctgctgtccacatctttacttctctctattttg 499

                                                                       
Query: 306 cccatcttttcattatcttctccttttagctaaaatgcaatcattaacagactaaaaacc 365
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cccatcttttcattatcttccccttttagctaaaatgcaatcattaacagactaaaaacc 439

                                                                       
Query: 366 gtactgataaaactttcaacccttgattagttggaatgaattgagacgtttctagctaaa 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtactgataaaactttcaacccttgattagttggaatgaattgagacgtttctagctaaa 379

                              
Query: 426 acaattattttcttattca 444
           |||||||||||||||||||
Sbjct: 378 acaattattttcttattca 360


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space:   361956
Effective search space used:   361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)