NTTATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAATCCG
CGGAATTCCCTAGTGTTCTCCCTCTGATTGGCATCAGATGGGAATTACAG
CCAAGCAAATTCTCCATATTATAACCCTATTATCTCTCATTCTCTCCCTC
CATCTATCTCTCTCGTGCTGTGCTTGGTTGGGCCTTATGGAAAGTTATCA
TTTGGATGCAAAACAATTATCCTAAAACAGTTTGCCAGAGTGGTCTGGAC
ACAGAGATTTATCTTCCCTCTCCTTCAGTGAAGAACATCTATCTTCCATG
ACCTCTTGATTACTGAAGCCTTCAGAATATATTCTTTGGTCTGTGACACT
GTGCACAGTGCGGGGCAGAGCATTAAATATCACCCTCTATGATTAATTGG
AAGTTAATTAAATCTATCACTGAAACAATGGGAAGGCAATGAGCTATGTA
ATCATTGCAATAGTAAATGAAATCATGTTCAGGTCTCTCCATCTCGCTTA
TTGACAATGATGGACAGGGGCCAGGCCTTGTATACCTTCTGAATCTGGCT
GGTCGACCTCTCCGGCTTGTGGACCCTTGCCAGCGGTCTCGGAAAAAAAT
TACCTTTTTCAAATCTTAGCTTTATGTATCAATTCCTCCTTTTTTTTTTC
TTACTTTCCGCACCTTTTTTTCCCTTCCTCTCTCTTTTTTATCTTATCTT
TTCGCTTTTCTCTCTTCCTTTGTTTTTCTTTCCTCTTTTCCTATTTTTCT
TCTTCTTGCCTTTCTTCATTTCTTTTATTTTCTTTCTTCTATTTTACTAT
ACTT

NNNTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACTCTGAAAAGCAAACAGCA
GGGCAAGCACTCCTGTGTAGGGTGGGTTTGGAAGCTGGACGCCCTCTAAG
GGATTCCTGACTGAGTAGGTGGGGTCCACAGGGTGTTGGTAAGGACATGT
AGGACTCCTTACTTAGGGCGATGCCCTTACCTAGAGGGAGGCAGCACCTG
CTAGCAGAGGAAGCAGAAACCGATATCAGAGTTCCAGATCGTGCAGAGAA
TGCCTCCCTTCACTCCTCTCAAGGGCCAGATTAGTCCGCACATTTGAACT
GACCCTCAGTGGGTCAAGGTCGTTCTCTGCTATTGCTACACTGTTGCTAG
CGGTCCTTTACCTTCCAGAGGGGGTGTTCAGTTCCCAAGTGGTAGATGAC
AACTCACACTTCCTTCTCTGGGCCCAGTATGCTTTTTTGTCACATCCTCT
ATTGAGCCTGGTCCTAACAAGCCTGGGTTTCTTCGCGATGGTGGTCCCTC
CTGGGCCTATTTCCTTGGTGTCTAGTTTGCTTCTTTTTCCTGACTCTTTG
TTTTTGTTGATGATTCTTTCCTCCCGAAGTTCCCGTCTTCACTTCTTTTC
TTTGCCCATCCCTTATTCGTGTCTCCTCCCCCACTTGATGCCATTTCTTC
CCTGGAATTCTCTCTCGCGTCTCTCTCTTCCCTTTTGTCTCTCTTTTTTT
TTCCTCTAATTTGTTCGTCTCCGTTTTTTGTCTCTT

Query= MSMg01no400_l22.b1 MSMg01no400_l22.b1 CHROMAT_FILE:
MSMg01no400_l22.b1 PHD_FILE: MSMg01no400_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:09 2005
         (432 letters)



>mm_chr5_101915092_101915923
          Length = 832

 Score =  789 bits (408), Expect = 0.0
 Identities = 408/408 (100%)
 Strand = Plus / Plus

                                                                       
Query: 25  tctgattggcatcagatgggaattacagccaagcaaattctccatattataaccctatta 84
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tctgattggcatcagatgggaattacagccaagcaaattctccatattataaccctatta 284

                                                                       
Query: 85  tctctcattctctccctccatctatctctctcgtgctgtgcttggttgggccttatggaa 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tctctcattctctccctccatctatctctctcgtgctgtgcttggttgggccttatggaa 344

                                                                       
Query: 145 agttatcatttggatgcaaaacaattatcctaaaacagtttgccagagtggtctggacac 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 agttatcatttggatgcaaaacaattatcctaaaacagtttgccagagtggtctggacac 404

                                                                       
Query: 205 agagatttatcttccctctccttcagtgaagaacatctatcttccatgacctcttgatta 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 agagatttatcttccctctccttcagtgaagaacatctatcttccatgacctcttgatta 464

                                                                       
Query: 265 ctgaagccttcagaatatattctttggtctgtgacactgtgcacagtgcggggcagagca 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ctgaagccttcagaatatattctttggtctgtgacactgtgcacagtgcggggcagagca 524

                                                                       
Query: 325 ttaaatatcaccctctatgattaattggaagttaattaaatctatcactgaaacaatggg 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ttaaatatcaccctctatgattaattggaagttaattaaatctatcactgaaacaatggg 584

                                                           
Query: 385 aaggcaatgagctatgtaatcattgcaatagtaaatgaaatcatgttc 432
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aaggcaatgagctatgtaatcattgcaatagtaaatgaaatcatgttc 632


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space:   348129
Effective search space used:   348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no400_l22.g1 MSMg01no400_l22.g1 CHROMAT_FILE:
MSMg01no400_l22.g1 PHD_FILE: MSMg01no400_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:09 2005
         (365 letters)



>mm_chr5_102077844_102078608
          Length = 765

 Score =  652 bits (337), Expect = 0.0
 Identities = 358/365 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aactctgaaaagcaaacagcagggcaagcactcctgtgtagggtgggtttggaagctgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aactctgaaaagcaaacagcagggcaagcactcctgtgtagggtgggtttggaagctgga 506

                                                                       
Query: 61  cgccctctaagggattcctgactgagtaggtggggtccacagggtgttggtaaggacatg 120
           | |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 505 ctccctctaagggattccggactgagaaggtggggtccacagggtgttggtaaggacatg 446

                                                                       
Query: 121 taggactccttacttagggcgatgcccttacctagagggaggcagcacctgctagcagag 180
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caggactccttacttagggcgatgcccttacctagagggaggcagcacctgctagcagag 386

                                                                       
Query: 181 gaagcagaaaccgatatcagagttccagatcgtgcagagaatgcctcccttcactcctct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaagcagaaaccgatatcagagttccagatcgtgcagagaatgcctcccttcactcctct 326

                                                                       
Query: 241 caagggccagattagtccgcacatttgaactgaccctcagtgggtcaaggtcgttctctg 300
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caagggccagaaaagtccgcacatttgaactgaccctcagtgggtcaaggtcgttctctg 266

                                                                       
Query: 301 ctattgctacactgttgctagcggtcctttaccttccagagggggtgttcagttcccaag 360
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctattgctacactgttgttagcggtcctttaccttccagagggggtgttcagttcccaag 206

                
Query: 361 tggta 365
           |||||
Sbjct: 205 tggta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space:   269136
Effective search space used:   269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)