Query= MSMg01no404_k05.b1 MSMg01no404_k05.b1 CHROMAT_FILE:
MSMg01no404_k05.b1 PHD_FILE: MSMg01no404_k05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:23 2005
(104 letters)
>mm_chr5_119818947_119819452
Length = 506
Score = 163 bits (84), Expect = 4e-45
Identities = 100/106 (94%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 1 atctggctgaagtct--gcagattgaatgctgattgccacactgaagtctggggccatgg 58
||||||||||||||| |||||||||||||||| ||||||||| |||| |||||||||||
Sbjct: 201 atctggctgaagtctgcgcagattgaatgctgagtgccacacttaagtttggggccatgg 260
Query: 59 gagattgattgcattcttagcatgtccccttttgaactgtggatgc 104
||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 gagattgattgcattcttagcatgtccccctttgaactgtggatgc 306
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 506
Length adjustment: 8
Effective length of query: 96
Effective length of database: 498
Effective search space: 47808
Effective search space used: 47808
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no404_k05.g1 MSMg01no404_k05.g1 CHROMAT_FILE:
MSMg01no404_k05.g1 PHD_FILE: MSMg01no404_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:23 2005
(201 letters)
>mm_chr5_120047873_120048472
Length = 600
Score = 369 bits (191), Expect = e-107
Identities = 197/199 (98%), Gaps = 1/199 (0%)
Strand = Plus / Minus
Query: 1 tccatccacatcacatacccggtaccgacagtggccttttgtgaaaacccacgtctctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tccatccacatcacatacccggtaccgacagtggccttttgtgaaaacccacgtctctga 339
Query: 61 tctcacattaattactacacaaatatactcattgtgggtaccaggcttataggatgaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tctcacattaattactacacaaatatactcattgtgggtaccaggcttataggatgaagt 279
Query: 121 cctcttcacacatgttcacaataaaaacacatttttccactcccttcccctgaccctaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cctcttcacacatgttcacaataaaaacacatttttccactcccttcccctgaccctaag 219
Query: 181 tgcggggggttggggggtg 199
|||||||| ||||||||||
Sbjct: 218 tgcggggg-ttggggggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 600
Length adjustment: 8
Effective length of query: 193
Effective length of database: 592
Effective search space: 114256
Effective search space used: 114256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
