CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTATCCCAGGTGGTTCCCGTTAGACCTTCTGTGTTTGCATTCCTCTG
TTTTATGTAAGAATCCAGTAACCTCTTTGTACCTTGCTGGTGTGTCACCC
AACTTCCTTATTGTCTTCTGCATAAAAAGTCTAATGCTCGATTTGACAAA
TTACATTGAGATTCCACACGACCTCTCCTGTGTGTGTCTTCTGTCAATTC
ATCATATGCTTTGTCCACCCGCGACTAGAGACCCGTTCCACGCAGACAAA
GGGGCCCAGAGGGTCTGCTGCACTGCTCTACATTTTGTCCCCACATTTCC
TTTAGATAGGAACAATTCTGGGTTAAATTTTTTGAGGTGGGTGGGTGGCC
CCATCCCTTAACTGAAGGCCATCCCATCTTATCTACAGACATCAAACTCC
GACACTATGGCTGATGCCAAGAAACGCTTGCTGACAGGAGGCTAGTATAG
CTGTCCCCTGAGAGGCTCTGCCAGGAACTGTCCGATACAGATGAAAATAC
AGCCAAACATTGGACTGAGTCTGGGGATCCCAATGGAAGGTAAGGACTGA
AGGGGATGAAGAGGATTGCAACCCCATAGGAAGAATAACAGCATCACCAA
CAAGACTTCTCAGAGCTCCTAAGGATTAACCACCATCAAAGACCCATGGG
AACCCTGGCTCCAGCTTGCTAATAAACAAAAAAAGGGCTTATTCTGGCTT
CAAAGGG

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTCTGACAAGGTCAGCTATTTGAAG
AAGCAATAAAGGATGGAAGAATCACACCCACTTAGAGATCAAGGAAAAGG
CAATATAGGAAATCAAAATTTTAATTTAATTCCACCAAATAAATGCCTAA
TGTAGTAATTTGTGTTTGAGACGAGTAAGTTAATTTCTGAAAATTATCCA
CAAGTGTTGGTATTTTGGCTAGAGTGGTCTCTATAGACATTTTCATGCCA
ACATTAGAAGATCCTTTTAAAATATATTTATATAATTTCGTGACTTAAGT
TTTAATGAAGAGTGTTTATGCACACATTCACGTATATGTATGTGTATGTG
CATATGTACATGTATATGTATGCAGAGACATATATAATATGTGTGCTCAC
AGTAAATTGAGCACATTCCCCTAAATCTTCACCTTCTCTTTTCTTATCTC
TCTCTTCTCTCCCCTTCGTCTCCATAGATACTTTCCCTTTTACTTTTATG
TCCCATATCGGAACATGATTTCACATAGTTACCTTAAAATCTAGGAACCA
CCAAAGAGGGAAAATATATACCCGATAATTTTCTTATTTCTAATTTTGGA
ACAAAAGGTTACAATTTAGGGTTGGGAATGAAACCCAAGGGGTTTTGGCC
TCGGGGAAAAATGGCTAATTTACCGAGGGAAAAAAATTTTATGCTGGGGC
GATAAATAAC

Query= MSMg01no407_f08.g1 MSMg01no407_f08.g1 CHROMAT_FILE:
MSMg01no407_f08.g1 PHD_FILE: MSMg01no407_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:57 2005
         (480 letters)



>mm_chr5_49185220_49186099
          Length = 880

 Score =  843 bits (436), Expect = 0.0
 Identities = 439/440 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttctgacaaggtcagctatttgaagaagcaataaaggatggaagaatcacacccactta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cttctgacaaggtcagctatttgaagaagcaataaaggatggaagaatcacacccactta 381

                                                                       
Query: 61  gagatcaaggaaaaggcaatataggaaatcaaaattttaatttaattccaccaaataaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gagatcaaggaaaaggcaatataggaaatcaaaattttaatttaattccaccaaataaat 321

                                                                       
Query: 121 gcctaatgtagtaatttgtgtttgagacgagtaagttaatttctgaaaattatccacaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gcctaatgtagtaatttgtgtttgagacgagtaagttaatttctgaaaattatccacaag 261

                                                                       
Query: 181 tgttggtattttggctagagtggtctctatagacattttcatgccaacattagaagatcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgttggtattttggctagagtggtctctatagacattttcatgccaacattagaagatcc 201

                                                                       
Query: 241 ttttaaaatatatttatataatttcgtgacttaagttttaatgaagagtgtttatgcaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 200 ttttaaaatatatttatataatttcgtgacttaagttttaatgaagagtgtttatacaca 141

                                                                       
Query: 301 cattcacgtatatgtatgtgtatgtgcatatgtacatgtatatgtatgcagagacatata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 cattcacgtatatgtatgtgtatgtgcatatgtacatgtatatgtatgcagagacatata 81

                                                                       
Query: 361 taatatgtgtgctcacagtaaattgagcacattcccctaaatcttcaccttctcttttct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80  taatatgtgtgctcacagtaaattgagcacattcccctaaatcttcaccttctcttttct 21

                               
Query: 421 tatctctctcttctctcccc 440
           ||||||||||||||||||||
Sbjct: 20  tatctctctcttctctcccc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space:   408900
Effective search space used:   408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)