CCGGTAGCGGGTTCCGTAGATCGCGACCATGACGCATGGGAATGCGGGGG
GACTATCTTACATCAAACAGAAGAATATACACAACGCAAATACCGTTTAA
ACCCCAACGACCAACGCCGGACGATGCCGATAAAAAAAATAATCGGCACT
ATTAAACACACAACCCCCCCGTTATGTATATTACAACGGTTCATACACTA
ACCCCAGATCGCCCAATATAACCTTATATTAATCTCTTCCGAACTTATAC
GCGATATTGAATTTGTAGAACTACAGCTTATACATCCGCGCTTTCCGAAT
TTACCGCGCGAACCGGATTGAGCTCGGTTGTGCTCGTGTTTCACAACACG
AAGTTTCCATTCATTTAATCGCTCGTTTCCGCCCAACACAAGGCGTTTAT
TTCTACTGCATTGACACTAATACAACAATAAAACTACACCAACTTATCAG
AACATTAACCGATATCTCGGATTGGCGTGACTGACGAGAGGACCTTCTGT
GATGAGACGCGAGCAACTCTAATTCATTAACGACGATTAGTAGTGGATTA
GGTAGTGGAACCTAGACCTGATAAAGTCAAAACTACATATAAATATTGTT
NNNNNNGGGGTTTTCCCGNNNNNNNNNNNNNTCCTTTTAAAATTAATCGA
ANNNGCCNTGGAATNCGAAACTNCANTNAANTTGCNNTAGNCNGACTGAT
CCNNNGNANNATNNCNCTGANGNGNNATGNNCNNGCACNGNNNGCAGNGG
NNTTNNNNGGGGCGANCTNANGCCNAGTTNNANNGCCTGACGTGNNNANN
NGTNGNCGGNAGTGNCNGTTNNTTCAAACGNNCGTCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAGCAGACTAGAAACAGAATTGAAGCTGGATATT
TAATCTGAAGGTCCTATAGTATCTCAAGTCTTCTAAGCATGAGTCACTTA
AATAATGTGTGAACAAACAAACTATTGAGAGAGTTAGAAAGATACTGTCT
CCTACAATATTATAAATGGTCATACAATTTAAACTTCACATGACATTTGC
AGCTGAAACATATCACTCTGGCCATGGATTTCTGATTATCTAAATGGAAT
TCACAAAGTATGCTTTGGGTGTAACTAAAGATTTTAAATTAGGAGTTAAA
ACAGTGTATTTTTTTCTAGTTCATTTACTATTTACATACAAGTACTTAGT
GTAATGATTCCAGTGTATTTAAAATCTTTCAAAAGTTCTTAAAATGTCCC
GACATTTATATTGATATTATTGAAGGTATAGTTTATAAAACATACAAAAT
ATTTGTATAAATAGAAATTTAGTGGTACACTGCTCCACAGTTGTAGAAAA
AAAAAAGAGTATAAATGTCTAATGATGAAATGTTATTTCATAAGTTAACA
ACATATTAGTATAGTGAAAGATTGCATAGCCCCTAAAATCAGTTTCTAAG
AGCACTACTACAGAAGAAACACCCCGGGCGCTGATGGCTTTGTTACAAAG
AAATGGCTGGTATTTGTGAAGCCCTGAATTTTCCGAAAGAGGGGGAAA

Query= MSMg01no413_b05.g1 MSMg01no413_b05.g1 CHROMAT_FILE:
MSMg01no413_b05.g1 PHD_FILE: MSMg01no413_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:39 2005
         (509 letters)



>mm_chr5_84729939_84730846
          Length = 908

 Score =  969 bits (501), Expect = 0.0
 Identities = 507/509 (99%), Gaps = 1/509 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcagactagaaacagaattgaagctggatatttaatctgaaggtcctatagtatctcaa 60
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 agcagactagaaacagaattgaagctggatatttaatctaaaggtcctatagtatctcaa 260

                                                                       
Query: 61  gtcttctaagcatgagtcacttaaataatgtgtgaacaaacaaactattgagagagttag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcttctaagcatgagtcacttaaataatgtgtgaacaaacaaactattgagagagttag 320

                                                                       
Query: 121 aaagatactgtctcctacaatattataaatggtcatacaatttaaacttcacatgacatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagatactgtctcctacaatattataaatggtcatacaatttaaacttcacatgacatt 380

                                                                       
Query: 181 tgcagctgaaacatatcactctggccatggatttctgattatctaaatggaattcacaaa 240
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 tgcagctgaaacatatcactctggccatggatttctgat-atctaaatggaattcacaaa 439

                                                                       
Query: 241 gtatgctttgggtgtaactaaagattttaaattaggagttaaaacagtgtatttttttct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtatgctttgggtgtaactaaagattttaaattaggagttaaaacagtgtatttttttct 499

                                                                       
Query: 301 agttcatttactatttacatacaagtacttagtgtaatgattccagtgtatttaaaatct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agttcatttactatttacatacaagtacttagtgtaatgattccagtgtatttaaaatct 559

                                                                       
Query: 361 ttcaaaagttcttaaaatgtcccgacatttatattgatattattgaaggtatagtttata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttcaaaagttcttaaaatgtcccgacatttatattgatattattgaaggtatagtttata 619

                                                                       
Query: 421 aaacatacaaaatatttgtataaatagaaatttagtggtacactgctccacagttgtaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaacatacaaaatatttgtataaatagaaatttagtggtacactgctccacagttgtaga 679

                                        
Query: 481 aaaaaaaaagagtataaatgtctaatgat 509
           |||||||||||||||||||||||||||||
Sbjct: 680 aaaaaaaaagagtataaatgtctaatgat 708


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 908
Length adjustment: 10
Effective length of query: 499
Effective length of database: 898
Effective search space:   448102
Effective search space used:   448102
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)