MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-413H06
Chromosome	5 (Build37)
Map Location	152,519,604 - 152,520,113
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Aprin, LOC100040180, Kl, LOC667510, Stard13, LOC630708, LOC625175, LOC100042166, EG435877, EG632649, EG632671, Rfc3
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	B3galtl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381694 MGI:2685903
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040089 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Rxfp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140498 MGI:2153463
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667470 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667470
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Fry (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320365 MGI:2443895
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 92 ESTs, 3 Proteins

name	LOC100042068 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Gm5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194292 MGI:2684851
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	XM_359419 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545824 MGI:3690051
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins

name	Brca2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12190 MGI:109337
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	B230342M21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100637 MGI:2140872
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC037393 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381695 MGI:2687207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aprin (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100710 MGI:2140945
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040180 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040180
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Kl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16591 MGI:1101771
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667510 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667510
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins pseudo : _no_value

name	Stard13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243362 MGI:2385331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC630708 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:630708
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC625175 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625175
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	LOC100042166 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042166
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG435877 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435877 MGI:3646250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG632649 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:632649 MGI:3648789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins

name	EG632671 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:632671 MGI:3645314
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 Proteins

name	Rfc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69263 MGI:1916513
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B3galtl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487080 GeneID:381694 MGI:2685903
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta 1,3-galactosyltransferase-like transcript_id : NM_001081204.1

name	LOC100040089 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254785 GeneID:100040089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100040089 transcript_id : XM_001474065.1

name	Rxfp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17978287 GeneID:140498 MGI:2153463
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : relaxin/insulin-like family peptide receptor 2 transcript_id : NM_080468.1

name	Fry (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254792 GeneID:320365 MGI:2443895
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 92 ESTs, 3 Proteins product : furry homolog (Drosophila) transcript_id : XM_001477828.1

name	LOC100042068 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254794 GeneID:100042068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042068 transcript_id : XM_001477843.1

name	Gm5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375873 GeneID:194292 MGI:2684851
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : gene model 5, (NCBI) transcript_id : XM_110552.6

name	XM_359419 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375874 GeneID:545824 MGI:3690051
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins product : Mus musculus sequence XM_359419 transcript_id : XM_359419.5

name	Brca2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487410 GeneID:12190 MGI:109337
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : breast cancer 2 transcript_id : NM_009765.2

name	Brca2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487408 GeneID:12190 MGI:109337
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : breast cancer 2 transcript_id : NM_001081001.1

name	B230342M21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922705 GeneID:100637 MGI:2140872
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230342M21 gene transcript_id : NM_133898.3

name	BC037393 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130950 GeneID:381695 MGI:2687207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC037393 transcript_id : NM_201369.2

name	Aprin (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129869 GeneID:100710 MGI:2140945
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : androgen-induced proliferation inhibitor transcript_id : NM_175310.5

name	LOC100040180 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254787 GeneID:100040180
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Ubtf protein transcript_id : XM_001474228.1

name	Kl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7705569 GeneID:16591 MGI:1101771
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : klotho transcript_id : NM_013823.1

name	Stard13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122850 GeneID:243362 MGI:2385331
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serologically defined colon cancer antigen 13 transcript_id : NM_146258.1

name	LOC625175 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254796 GeneID:625175
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : region containing RIKEN cDNA 1700028E10 gene; hypothetical protein A630054D14 transcript_id : XM_001477948.1

name	LOC100042166 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254798 GeneID:100042166
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042166 transcript_id : XM_001477959.1

name	EG632649 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254790 GeneID:632649 MGI:3648789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins product : predicted gene, EG632649 transcript_id : XM_991114.2

name	EG632671 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375882 GeneID:632671 MGI:3645314
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 Proteins product : predicted gene, EG632671 transcript_id : XM_991140.1

name	Rfc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375638 GeneID:69263 MGI:1916513
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : replication factor C (activator 1) 3 transcript_id : NM_027009.2

name	B3galtl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487081 GeneID:381694 MGI:2685903
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 product : beta 1,3-galactosyltransferase-like protein_id : NP_001074673.1

name	LOC100040089 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254786 GeneID:100040089
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474115.1

name	Rxfp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17978288 CCDS:CCDS19886.1 GeneID:140498 MGI:2153463
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0016500 - protein-hormone receptor activity [Evidence IMP]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence IMP]; GO:0008584 - male gonad development [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : G protein coupled receptor affecting testicular descent; G protein-coupled receptor 106 product : leucine-rich repeat-containing G protein-coupled receptor 8 protein_id : NP_536716.1

name	Fry (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254793 GeneID:320365 MGI:2443895
definition	codon_start : 1 product : furry homolog protein_id : XP_001477878.1

name	LOC100042068 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254795 GeneID:100042068
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477893.1

name	Gm5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82900065 GeneID:194292 MGI:2684851
definition	codon_start : 1 product : hypothetical protein LOC194292 protein_id : XP_110552.4

name	XM_359419 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82900067 GeneID:545824 MGI:3690051
definition	codon_start : 1 product : similar to zygote arrest 1-like protein protein_id : XP_359419.4

name	Brca2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487409 GeneID:12190 MGI:109337
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0003697 - single-stranded DNA binding [Evidence ISS] GO_process : GO:0006338 - chromatin remodeling [Evidence ISS]; GO:0006281 - DNA repair [Evidence IEA]; GO:0000724 - double-strand break repair via homologous recombination [Evidence ISS] [Evidence IDA]; GO:0006325 - establishment and/or maintenance of chromatin architecture [Evidence ISS]; GO:0007093 - mitotic checkpoint [Evidence ISS]; GO:0007090 - regulation of S phase of mitotic cell cycle [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence TAS] codon_start : 1 product : breast cancer 2 protein_id : NP_001074470.1

name	Brca2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487411 GeneID:12190 MGI:109337
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0003697 - single-stranded DNA binding [Evidence ISS] GO_process : GO:0006338 - chromatin remodeling [Evidence ISS]; GO:0006281 - DNA repair [Evidence IEA]; GO:0000724 - double-strand break repair via homologous recombination [Evidence ISS] [Evidence IDA]; GO:0006325 - establishment and/or maintenance of chromatin architecture [Evidence ISS]; GO:0007093 - mitotic checkpoint [Evidence ISS]; GO:0007090 - regulation of S phase of mitotic cell cycle [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence TAS] codon_start : 1 product : breast cancer 2 protein_id : NP_033895.2

name	B230342M21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78126153 CCDS:CCDS19887.1 GeneID:100637 MGI:2140872
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC100637 protein_id : NP_598659.2

name	BC037393 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41235761 CCDS:CCDS19888.1 GeneID:381695 MGI:2687207
definition	codon_start : 1 note : protein from BCRA2 region product : hypothetical protein LOC381695 protein_id : NP_958757.1

name	Aprin (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66955886 GeneID:100710 MGI:2140945
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0042127 - regulation of cell proliferation [Evidence ISS] codon_start : 1 product : androgen-induced prostate proliferative shutoff associated protein AS3 protein_id : NP_780519.3

name	LOC100040180 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254788 GeneID:100040180
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474278.1

name	Kl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7705570 CCDS:CCDS19889.1 GeneID:16591 MGI:1101771
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004566 - beta-glucuronidase activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0015926 - glucosidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA] GO_process : GO:0007568 - aging [Evidence IMP]; GO:0006112 - energy reserve metabolism [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation function : involved in regulation of ageing note : secreted form of Klotho protein product : klotho protein_id : NP_038851.1

name	Stard13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734987 CCDS:CCDS19890.1 GeneID:243362 MGI:2385331
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : serologically defined colon cancer antigen 28 product : serologically defined colon cancer antigen 13 protein_id : NP_666370.2

name	LOC625175 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254797 GeneID:625175
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477998.1

name	LOC100042166 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254799 GeneID:100042166
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478009.1

name	EG632649 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254791 GeneID:632649 MGI:3648789
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_996208.2

name	EG632671 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375883 GeneID:632671 MGI:3645314
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_996234.1

name	Rfc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249204 GeneID:69263 MGI:1916513
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence IEA] codon_start : 1 note : replication factor C 3; replication factor C, 38 kDa product : replication factor C (activator 1) 3 protein_id : NP_081285.1

name	LOC667470 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667470
definition	number : 1 pseudo : _no_value

name	LOC667470 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667470
definition	number : 2 pseudo : _no_value

name	LOC667470 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667470
definition	number : 3 pseudo : _no_value

name	LOC630708 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630708
definition	number : 1 pseudo : _no_value

name	LOC630708 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630708
definition	number : 2 pseudo : _no_value

name	EG435877 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435877
definition	number : 7 pseudo : _no_value

name	EG435877 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435877
definition	number : 6 pseudo : _no_value

name	EG435877 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435877
definition	number : 5 pseudo : _no_value

name	EG435877 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435877
definition	number : 4 pseudo : _no_value

name	EG435877 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435877
definition	number : 3 pseudo : _no_value

name	EG435877 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435877
definition	number : 2 pseudo : _no_value

name	EG435877 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435877
definition	number : 1 pseudo : _no_value

name	LOC667510 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254789 GeneID:667510
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins product : similar to neural precursor cell expressed, developmentally down-regulated gene 1 pseudo : _no_value transcript_id : XR_031666.1

clone name	MSMg01-446G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398E19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-147C17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-365K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387J19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-479O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326P08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-116B22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-110D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497A08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-336B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069O12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-413H06.T7 (MSMg01no413_h06.b1)	MSMg01-413H06.TJ (MSMg01no413_h06.g1)
ACC	AG509984	AG509985
length	740	753
length of high quality (start - end)	565 (40 - 604)	398 (72 - 469)
definition	CHROMAT_FILE: MSMg01no413_h06.b1 PHD_FILE: MSMg01no413_h06.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:31:08 2005	CHROMAT_FILE: MSMg01no413_h06.g1 PHD_FILE: MSMg01no413_h06.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:31:08 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT TTCTCTTCTCAGATGTTTCATCTATTTCCTGCCTATGCCATATGCCATAG GGTTCTTAATTGATACAATAAACAAGATATTCTCTCTACAACAAATTTGT GATTCTCCATTTCAACAATCATCTTGAAAATTTATTCCAAGTTCCTGAAA AGTTTATAGAGATGAAACGTAGCAGAGCTGTAGCATTTGGAGTCTATCTG GGTGTGGTCCTGTGGAGTATTTGGCCTACAGACCCCTAGCTGGCTGAGCT GTGTGCTAAGAAGTACTTTAACTTTAGGTTGTAATAAGAGCATTTTATTC CATTTTCAGCATAGATGCAGACCTCATGGAACATGCCCATAGTACTAAGA TAATAACTTTGAATTAAGACTATAAAAATGAAGAGAAATCATCCAGAATT ACTCATGGTCTTTCAGGAGAAATGACCACTTCAGCAGCACGCTGTGGCTG GACCCATTTTTAGAACAATTAAAAAAAATTAAAAATTAAAAAATGTAATT TTGCATTACAACTAAGTTGTTACATATTCATAAAAATACTGAACTGAAGT TACCAGGCGCATGAAATGTAAAAGTGCTCATCATAAGCTTGGCGGGAATC CCCTCAGAGATGTCTGATGACAAATGTGCCATTTCCTATCATTGAAAAGA AAATGCTTCCAATAAGAAAATATCAAAGACTCCCTTTGGG	ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXTTATGACAAGGTGACCATGTTTTGAAGAA AACTGTGTAAGGACTTTCGAACTTTGGTCTCGAAGAGCCATTGGGTTTTA AGAGCTCAGTGAAGAACAGGCAGCTGGAGCCTAGAAGATAAGCTATGTGT TGCAAAGAGCAGACCTGGAGAAGTGACTCAAGTCCTTGGAGGAACTCAGA AGATGGTAAGTGGATCCCAGATATTGGGAGGTTAGAGTTTGATTTTGCTT GTTGTGACTGTGCCCCGATATTTTTCCCTCTTGAAAGAAGTATTTTAGTG GAGCTCTCAGTTAAGAGACTGAATTGTAAAATTCAAAATGAAGGGTTTGA ACTTTTAATATGCAAAGACTGTGGGACTTTTAAAGTTATTTAGAACTTGG GGGCGAATAAGAAAGTAAGGGTTAAGGCTTACTCATAATGTGTGTGTCAA GTTGACTAAAGGTCCATTGCACTGGCTGGTTTTGAGTGTCTATTTTGCTC CAGCTGGACGTTATCCTTATAAAGGAGCTTCCTCATGAGGATAAGGCCCC CCCCGCGATCCATATGTAAGGTATCTTTTTTATTTTCTGGTTTACGGTCT CGACCTCCCTTTTCTTATGTGTGCCTCCCCCCTCCCTGGGTCTATCTCCG TTTTCTTCTAAATTCTCGCCTTATCCCTTCTTCTTTTCTTCACTCCCCTC CCG
quality values	Open. Hide. 31 37 39 39 37 37 30 28 15 19 9 9 9 17 17 37 37 44 30 20 24 22 20 21 21 10 8 6 6 6 6 10 10 13 18 21 25 29 29 31 59 59 59 36 36 35 35 37 42 57 57 57 59 59 41 41 18 18 11 11 9 9 12 23 27 42 42 48 42 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 50 59 57 68 68 68 68 68 68 68 51 51 51 51 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 50 50 50 50 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 43 43 35 43 43 43 44 43 31 31 39 43 43 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 52 52 59 59 57 57 57 57 57 57 57 59 57 54 54 59 59 59 57 57 57 59 59 68 57 57 59 59 57 59 57 57 57 57 54 54 54 54 47 57 57 57 57 54 54 54 57 59 57 57 57 48 48 57 59 59 54 57 59 59 59 43 43 36 42 39 47 35 39 39 43 43 48 57 57 57 57 57 44 43 43 43 43 43 57 57 43 43 43 43 37 43 43 57 47 47 41 39 37 37 37 39 39 30 19 9 9 9 9 18 21 25 25 14 14 13 25 25 33 33 40 40 37 37 39 28 24 17 17 17 29 25 39 32 37 32 26 23 25 25 40 28 35 35 34 30 18 12 12 12 24 26 43 43 43 25 25 25 28 30 37 37 30 30 34 34 30 21 21 11 10 8 8 8 8 10 24 18 18 13 13 17 16 17 20 20 19 19 14 14 19 14 12 12 17 17 16 14 18 30 24 30 24 19 14 14 10 15 14 11 8 8 8 9 8 8 9 10 8 8 11 10 12 9 9 9 10 11 11 12 12 12 19 19 26 17 16 16 11 11 11 12 9 12 10 11 10 14 22 18 18 11 11 11 16 18 10 8 8 8 8 8 8 13 13 10 18 12 10 15 8 9 10 9 9 10 10 8 8 8 8 8 8 8 8 8 8 11 8 8 9 13 10 11 10 10 10 9 10 9 9 11 8 6 8 6 6 6 6	Open. Hide. 9 9 9 9 13 12 25 30 32 32 31 30 44 44 44 47 47 39 39 39 39 39 39 39 25 25 9 9 9 9 12 12 9 10 10 13 13 26 22 31 25 25 34 34 36 36 36 36 33 33 50 50 42 33 27 16 11 10 11 11 19 12 12 15 23 18 30 31 31 33 33 59 50 50 57 36 36 36 50 50 50 57 50 50 50 50 50 50 50 50 59 68 68 68 68 68 68 68 59 59 57 54 54 54 54 68 57 59 59 59 59 59 59 68 68 57 57 43 43 43 59 59 59 68 68 68 68 68 57 57 57 57 57 59 59 59 57 44 40 40 44 57 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 48 52 57 57 57 57 57 57 57 57 57 57 57 57 57 54 57 57 57 57 57 57 57 57 57 57 57 57 51 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 57 57 44 43 39 39 43 43 43 57 57 47 59 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 68 68 68 68 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 57 57 57 48 48 48 48 47 41 30 32 20 21 21 14 14 14 30 31 59 47 47 47 59 59 48 48 47 59 47 48 48 59 57 57 57 57 57 57 59 59 57 48 48 59 57 59 59 59 59 68 46 43 37 35 35 37 42 39 30 30 39 39 43 48 57 57 48 43 43 43 37 37 42 42 43 59 44 37 30 28 33 33 41 41 42 42 42 42 43 46 48 57 57 57 57 54 54 54 57 57 57 57 48 48 48 44 44 33 28 28 33 36 42 59 47 39 37 37 42 41 57 57 57 57 57 50 48 48 48 47 47 48 48 48 43 43 37 37 35 42 42 46 43 43 43 30 30 17 17 17 32 28 26 22 17 17 22 30 33 28 24 18 13 13 13 22 25 23 23 23 28 19 18 13 13 7 7 8 8 9 15 19 24 28 37 37 37 28 28 28 29 29 28 21 15 10 10 10 14 14 11 11 11 12 12 17 16 21 14 15 15 19 19 12 12 15 22 20 13 10 10 8 8 8 8 8 8 11 13 10 10 10 10 10 10 10 8 8 8 9 10 10 10 10 12 12 10 10 10 9 6 6 6 6 8 6 8 8 8 13 9 10 12 12 15 12 15 10 10 10 10 10 10 10 8 8 8 8 8 8 9 10 9 8 8 6 6 6 6 8 8 8 8 12 16 24 10 10 6 7 6 6 8 10 10 9 9 9 11 12 15 11 11 11 10 10 9 10 9 9 9 12 11 12 11 11 11 11 15 10 9 8 7 8 8 8 8 8 8 8 9 10 10 8 8 8 8 8 8 8 10 8 8 8 15 12 8 8 8 6 8 6 6 12 6 8 8 8 10 10 10 11 11 22 21 12 11 11 12 11 11 11 11 11 11 12 10 8 8 8 8 8 8 10 8 8 8 10 6 6 8 8 9 11 11 13 11 11 10 11 11 11 11 11 11 10 10 10 9 9 8 9 10 9 8 10 10 10 8 8 8 8 10 10 14 11 8 8 8 8 12 12 8 8 8 8 7 7

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no413_h06.b1 MSMg01no413_h06.b1 CHROMAT_FILE:
MSMg01no413_h06.b1 PHD_FILE: MSMg01no413_h06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:08 2005
         (565 letters)



>mm_chr5_152519390_152520354
          Length = 965

 Score =  986 bits (510), Expect = 0.0
 Identities = 510/510 (100%)
 Strand = Plus / Minus

                                                                       
Query: 55  gccatagggttcttaattgatacaataaacaagatattctctctacaacaaatttgtgat 114
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gccatagggttcttaattgatacaataaacaagatattctctctacaacaaatttgtgat 665

                                                                       
Query: 115 tctccatttcaacaatcatcttgaaaatttattccaagttcctgaaaagtttatagagat 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tctccatttcaacaatcatcttgaaaatttattccaagttcctgaaaagtttatagagat 605

                                                                       
Query: 175 gaaacgtagcagagctgtagcatttggagtctatctgggtgtggtcctgtggagtatttg 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gaaacgtagcagagctgtagcatttggagtctatctgggtgtggtcctgtggagtatttg 545

                                                                       
Query: 235 gcctacagacccctagctggctgagctgtgtgctaagaagtactttaactttaggttgta 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gcctacagacccctagctggctgagctgtgtgctaagaagtactttaactttaggttgta 485

                                                                       
Query: 295 ataagagcattttattccattttcagcatagatgcagacctcatggaacatgcccatagt 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ataagagcattttattccattttcagcatagatgcagacctcatggaacatgcccatagt 425

                                                                       
Query: 355 actaagataataactttgaattaagactataaaaatgaagagaaatcatccagaattact 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 actaagataataactttgaattaagactataaaaatgaagagaaatcatccagaattact 365

                                                                       
Query: 415 catggtctttcaggagaaatgaccacttcagcagcacgctgtggctggacccatttttag 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 catggtctttcaggagaaatgaccacttcagcagcacgctgtggctggacccatttttag 305

                                                                       
Query: 475 aacaattaaaaaaaattaaaaattaaaaaatgtaattttgcattacaactaagttgttac 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aacaattaaaaaaaattaaaaattaaaaaatgtaattttgcattacaactaagttgttac 245

                                         
Query: 535 atattcataaaaatactgaactgaagttac 564
           ||||||||||||||||||||||||||||||
Sbjct: 244 atattcataaaaatactgaactgaagttac 215


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space:   530025
Effective search space used:   530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information