Query= MSMg01no413_l07.b1 MSMg01no413_l07.b1 CHROMAT_FILE:
MSMg01no413_l07.b1 PHD_FILE: MSMg01no413_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:28 2005
(400 letters)
>mm_chr5_37111248_37112047
Length = 800
Score = 729 bits (377), Expect = 0.0
Identities = 391/396 (98%)
Strand = Plus / Plus
Query: 5 gaattcaactctcttctcccatcatgtgggctcaagagatcgaacttcgattgctaggct 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaactctctccttccatcatgtgggctcaagagatcgaacttcgattgctaggct 264
Query: 65 ttgaggcaagcacctttatgtgctgtgccatcttaccagccccatattcaatcttacggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgaggcaagcacctttatgtgctgtgccatcttaccagccccatattcaatcttacggt 324
Query: 125 atgctgaggatagaaccgggactctgtgcatgctaagcaagcactctaccaactgagctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgctgaggatagaaccgggactctgtgcatgctaagcaagcactctaccaactgagctc 384
Query: 185 catccccacactcgggatatcccttatcaagagacagagacagagtgtgtctctcttatc 244
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catccccacactcgggatctcccttatcaagagacagagacagagtgtgtctctcttatc 444
Query: 245 aagagtgctaacccactcatcaagttcatggcttactcatttctgaacctacttccacct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagagtgctaacccactcatcaagttcatggcttactcatttctgaacctacttccacct 504
Query: 305 acacctgctatgtcaccttaagagtgagaagccaacatgtgaatttggnggtgacagtca 364
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 505 acacctgctatgtcaccttaagagtgagaagccaacatgtgaatttgggggtgacagtca 564
Query: 365 gcatgaattgcgaagctgtccagggctcacaggaca 400
|||||||||| |||||||||||||||||||||||||
Sbjct: 565 gcatgaattgggaagctgtccagggctcacaggaca 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_l07.g1 MSMg01no413_l07.g1 CHROMAT_FILE:
MSMg01no413_l07.g1 PHD_FILE: MSMg01no413_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:28 2005
(249 letters)
>mm_chr5_37269775_37270425
Length = 651
Score = 462 bits (239), Expect = e-135
Identities = 248/251 (98%), Gaps = 2/251 (0%)
Strand = Plus / Minus
Query: 1 tcttttggctgtcctggaactaaatagaccaggttggctccaaactcagagatccttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tcttttggctgtcctggaactaaatagaccaggttggctccaaactcagagatccttctg 494
Query: 61 cctccagagtgctgcaattaaaggtgtgtgtaccacacccggagctacagaattcttccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cctccagagtgctgcaattaaaggtgtgtgtaccacacccggagctacagaattcttccg 434
Query: 121 ggg-gtgggggg-gcttttagactgaaagcaagagctttaatttggtaaggtcatgtggc 178
||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gggaggggggggcgcttttagactgaaagcaagagctttaatttggtaaggtcatgtggc 374
Query: 179 aaagatggcagcccaccaagatccacactctcttaataataccaccattcctgggttacc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aaagatggcagcccaccaagatccacactctcttaataataccaccattcctgggttacc 314
Query: 239 tagccacagac 249
|||||||||||
Sbjct: 313 tagccacagac 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 651
Length adjustment: 9
Effective length of query: 240
Effective length of database: 642
Effective search space: 154080
Effective search space used: 154080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
