Query= MSMg01no413_p08.b1 MSMg01no413_p08.b1 CHROMAT_FILE:
MSMg01no413_p08.b1 PHD_FILE: MSMg01no413_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:49 2005
(519 letters)
>mm_chr5_49291695_49292611
Length = 917
Score = 685 bits (354), Expect = 0.0
Identities = 376/384 (97%), Gaps = 3/384 (0%)
Strand = Plus / Minus
Query: 1 ccattagctaaaagctgccttctagccatcctcctggatgtttttgttttgctttgtctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccattagctaaaagctgccttctagccatcctcctggatgtttttgttttgctttgtctt 322
Query: 61 ttaaagcacatttaaaaaaaatctctttatattccaccaccatagaacacatagtatgtc 120
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaaagcacatt--aaaaaaatctctttatattccaccaccatagaacacatagtatgtc 264
Query: 121 acttggcagttccatcagaaacatatgttgctaaccagaatgctaatggtgtaaaaaaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 263 acttggcagttccatcagaaacatatgttgctaaccagaatgctaatggtgt-aaaaaaa 205
Query: 181 aaaactgtataatccttattcctttaatgtgagtagcagtagtgactacgttagagtgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aaaactgtataatccttattcctttaatgtgagtagcagtagtgactacgttagagtgtc 145
Query: 241 actagtgaattatttatgataagagaaattccacagatgtagcccaggttccaaattagt 300
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 144 actagtgaaaaacttatgataagagaaattccacagatgtagcccaggttccaaattaat 85
Query: 301 taaatccgacttacccaaaatggatgataccacaagtgactctgacctaatgaagaagcc 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 taaatctgacttacccaaaatggatgataccacaagtgactctgacctaatgaagaagcc 25
Query: 361 ctgaactatggtcagagagtagtg 384
||||||||||||||||||||||||
Sbjct: 24 ctgaactatggtcagagagtagtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 917
Length adjustment: 10
Effective length of query: 509
Effective length of database: 907
Effective search space: 461663
Effective search space used: 461663
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_p08.g1 MSMg01no413_p08.g1 CHROMAT_FILE:
MSMg01no413_p08.g1 PHD_FILE: MSMg01no413_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:49 2005
(545 letters)
>mm_chr5_49122498_49123442
Length = 945
Score = 329 bits (170), Expect = 4e-94
Identities = 173/174 (99%)
Strand = Plus / Plus
Query: 1 ttctcaagtaagcctggacattaattatgattctaaagttcccaagtgatccttctgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctcaagtaagcctggacattaattatgattctaaagttcccaagtgatccttctgaat 260
Query: 61 gtctggtttgagtatccttgtatgtctgcctcagaaccattttacattctaaaatttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctggtttgagtatccttgtatgtctgcctcagaaccattttacattctaaaatttgct 320
Query: 121 ctccccttgttcccttgatatatatcacaatgcaatttaaaaatacttttcact 174
||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 ctccccttgttcccttgatatatataacaatgcaatttaaaaatacttttcact 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
