XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCACG
GGTATACTCCTGGTGGTTGATCCATTGTGAAATAACAGTTTCATCCCCTC
CTGCCACAAGAGGGGAACACAAGAAAAGTGGCAAAAGGGCTCTATATCTG
GGAATTGCTACTAAAACTTAAATATTTTCTAAGCCTTCAAATGTGTTAAA
TATATAATTAATTATCAGCTTTTAAACACTAGCATCACATGCTTAAAGAT
GTTTTTGAACGAGGTTTAAGCTAGTCTTTAAATTAGTCATGTGACTCAAA
TGTATGTTTTCACTATAAGAATTTAAAAGAAAAAGTTATCTATTGTGCTT
GCTTCACTCATTTTCATGCTCCCCAGAAAAGCTGAATTGTAACCTTTTTC
TATTTGCTCTTTAAGTTTTGACACGTCTGCTTTAGTTGACAGTAGTATAT
TAAATCTATTTTGGTGGTATTTTTGTTTGGCATATTTCATTAATCCACTG
TTTTCAAATTCACCAAAATTTAATTTTAAATTCATTGCTTCTTTTTTTTT
ACAGCTTTATGAGTAAGTGCCCAGGCAAAGCAATGTTAATAACTACATAT
TCTGTATTTTTAAACAAAAGTAACAACAGTAAGGGGAACTACCCATGAAT
TGTGGCAGAAGTGGGGAAATTAATCTATGGGACAACCCTACAGACGCTTT
CAGACTTTGACTGTAAGCTTTTTTGTGACTAGTTTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTCTATGTGGTGTGTGTGTTATCCTCTGCAAGGGGGCT
GTAGCTGTCACTTTGAGGAAAGCAACCCTTTTGTCTTAGCAGTGGACTTA
GTTGTTTTGGAATTTGCGTAGAACCTCATTGGTTGACAAGTCAATTAAAT
GCAACCCAAGCCCTGCTGCTGGAAGCCTTACCTGGCAAGAAGAGTTGGTG
AGCTGAAATTCTGTATCCCCCATTATTAGGAATCTGCATTAGGGTCACCT
TCATAAATCCAGGAAGTTTCCACTGCATTTGGTTTCTAACTGCATGGCCC
CCACCAAGTGTTCTCCAATTCCAGTGGTCCAGCTAAAAATGTCTCTCTCC
ATGTCTGGTCCCCTTTGATAAGCACCTATCCACTCCTGCATATACTTCTA
TGCATCCCTAGTCAGTCTGTAAAATCTATTAAATTCATTCTATAATATTT
ATTTCTGTGTCCTCCTAGAAGACTCTTTGCCTAATTTATATATGTATATG
AATTACAGCTTGGTTATCATCTACTTAATGGGGAATATCCATGTATAATG
CATACATACACATGTAATTTTCTAGAACTGCATTTCTTCTCTCCCGATAA
TTTTTTTCTACTTACCGCCATTTGCCCGAAGAATTCATGGAAACGTTTTT
TTTTAAAAAAAGGGGAAATTATATTGTAAAATGGACCCCTTTTCTTCCCC
TTN

Query= MSMg01no413_p09.b1 MSMg01no413_p09.b1 CHROMAT_FILE:
MSMg01no413_p09.b1 PHD_FILE: MSMg01no413_p09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:49 2005
         (595 letters)



>mm_chr5_83265146_83266142
          Length = 997

 Score = 1002 bits (518), Expect = 0.0
 Identities = 576/600 (96%), Gaps = 10/600 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccacgggtatactcctggtggttgatccat-tgtgaaataacagtttcatcccct 63
           ||||||||| |||| | ||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 716 gaattccacaggtagaatcccggtggttgatccatgtgtgaaataacagtttcatcccct 657

                                                                       
Query: 64  cctgccacaagaggggaacacaagaaaagtggcaaaagggctctatatctgggaattgct 123
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 656 cctgccacaagaggggaacacaagaaaagtggcaaaggggctctatatctgggaactgct 597

                                                                       
Query: 124 actaaaacttaaatattttctaagccttcaaatgtgttaaatatataattaattatcagc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 actaaaacttaaatattttctaagccttcaaatgtgttaaatatataattaattatcagc 537

                                                                       
Query: 184 ttttaaacactagcatcacatgcttaaagatgtttttgaacgaggtttaagctagtcttt 243
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 536 ttttaaacactagcatcacatgcttaaagatgtttttgaatgaggtttaagctagtcttt 477

                                                                       
Query: 244 aaattagtcatgtgactcaaatgtatgttttcactataagaatttaaaagaaaaagttat 303
           ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 476 aaattagtcatgtgactcaaatgtatgttttcactaggagaatttaaaagaaaaagttat 417

                                                                       
Query: 304 ctattgtgcttgcttcactcattttcatgctccccagaaaagctgaattgtaaccttttt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ctattgtgcttgcttcactcattttcatgctccccagaaaagctgaattgtaaccttttt 357

                                                                       
Query: 364 ctatttgctctttaagttttgacacgtctgctttagttgacagtagtatattaaatctat 423
           ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 356 ctatttgctctttaagttttgacacttatgctttagttgacagtagtatattaaatctat 297

                                                                       
Query: 424 tttggtggtatttttgtttggcatatttcattaatccactgttttcaaattcaccaaaat 483
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 296 tttggtggtatttttgtttggcatatttcattaatccactgttctcaaattcaccaaaat 237

                                                                       
Query: 484 ttaattttaaattcattgcttctt--------tttttttacagctttatgagtaagtgcc 535
           ||| ||||||||||||||||||||        |||||||||||||| | |||||||||||
Sbjct: 236 ttatttttaaattcattgcttcttcttttttttttttttacagctt-acgagtaagtgcc 178

                                                                       
Query: 536 caggcaaagcaatgttaataactacatattctgtatttttaaacaaaagtaacaacagta 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 caggcaaagcaatgttaataactacatattctgtatttttaaacaaaagtaacaacagta 118


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 997
Length adjustment: 10
Effective length of query: 585
Effective length of database: 987
Effective search space:   577395
Effective search space used:   577395
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)