Query= MSMg01no415_p10.b1 MSMg01no415_p10.b1 CHROMAT_FILE:
MSMg01no415_p10.b1 PHD_FILE: MSMg01no415_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:29 2005
(370 letters)
>mm_chr5_149636773_149637542
Length = 770
Score = 621 bits (321), Expect = 0.0
Identities = 339/345 (98%)
Strand = Plus / Plus
Query: 25 ctgactctatttattattattatggatataattataattatggtccgcgtaatggattct 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ctgactctatttattattattatggatataattataattatggtccgcgtaatggattct 284
Query: 85 caacaatgctttccactgtgtatcaacaaagttcccagccactggcttgccgtggacaaa 144
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 285 caacaatgctttccactgtgtatcaacaaagttcccagccactggcttgtcgtggacaaa 344
Query: 145 ggctgtgcttttttatttatttatttttgaatataagatgccatcctgagggacgctaaa 204
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 345 ggctgtgcttttttatttatttatttttgaatataagatgccatcctgagagacgctaaa 404
Query: 205 gccgctgggatcctgggactcacatggcctggacttaacaagtgtcttccctatttcttt 264
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gccactgggatcctgggactcacatggcctggacttaacaagtgtcttccctatttcttt 464
Query: 265 ttctgatttctgtccagaaacagctcagcgattgtcatgacaacctgaagagaggacgcg 324
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 465 ttctgatccctgtccagaaacagctcagcgattgtcatgacaacctgaagagaggacgtg 524
Query: 325 ctgtacagccacccagagcggggacagagggtccctgtgacagga 369
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ctgtacagccacccagagcggggacagagggtccctgtgacagga 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_p10.g1 MSMg01no415_p10.g1 CHROMAT_FILE:
MSMg01no415_p10.g1 PHD_FILE: MSMg01no415_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:29 2005
(452 letters)
>mm_chr5_149818773_149819625
Length = 853
Score = 845 bits (437), Expect = 0.0
Identities = 449/453 (99%), Gaps = 1/453 (0%)
Strand = Plus / Minus
Query: 1 tgaatttttaaaacatttaaaaaatacaaag-aaaaaaaaaccaacccccaaaccacaca 59
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 653 tgaatttttaaaacattttaaaaatacaaagaaaaaaaaaaccaacccccaaaccacaca 594
Query: 60 caccagtccgaaaccaagcaacagataactaaaacctgggctacataggaccctagttcc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 caccagtccgaaaccaagcaacagataactaaaacctgggctacataggaccctagttcc 534
Query: 120 taacttcagccagaatctaggatacagtttcacagaagggaatttaactatatagtagac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 taacttcagccagaatctaggatacagtttcacagaagggaatttaactatatagtagac 474
Query: 180 agtggttcctaggagcagtccagggatgggtttgtgtggaaataggctcagtgctcaggt 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 agtggttcctaggagcagtccagggatgggtttgtgtggaaataggctcagtgctcaggg 414
Query: 240 tttggaatgtctctatcacttctgtccctgggtatcacttaagtacttagggtgagttcc 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gttggaatgtctctatcacttctgtccctgggtatcacttaagtacttagggtgagttcc 354
Query: 300 agtctcaccctagacacctgcttccctcgtatgcactgcgatgggtggggttaatcctac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agtctcaccctagacacctgcttccctcgtatgcactgcgatgggtggggttaatcctac 294
Query: 360 cagaccaacattaggttagcatatacttgcttgcttacgggttcgtctgctttgggagcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 cagaccaacattaggttagcatatacttgcttgcttacgggttcgtctgctttgggagcc 234
Query: 420 aaggtcttaaagactcattgtgtctactgtatc 452
|||||||||||||||||||||||||||||||||
Sbjct: 233 aaggtcttaaagactcattgtgtctactgtatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 853
Length adjustment: 10
Effective length of query: 442
Effective length of database: 843
Effective search space: 372606
Effective search space used: 372606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
