MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-419N07
Chromosome	5 (Build37)
Map Location	134,560,563 - 134,560,807
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100039731, LOC666038, LOC100039750
Downstream gene	Gats, Wbscr16, Gtf2ird2, Ncf1, Gtf2i, LOC630424, Gtf2ird1, LOC100039820, Clip2, EG666071, Gm52, Rfc2, Lat2, Eif4h, LOC638081, Limk1, Eln, Wbscr28, Cldn13, Wbscr27, Cldn4, Cldn3, Abhd11, Stx1a, Wbscr22, Wbscr18, Vps37d
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039731 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039731
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 1373 ESTs, 5 Proteins

name	LOC666038 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 30 ESTs

name	LOC100039750 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039750
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Gats (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80909 MGI:1933384
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wbscr16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94254 MGI:2137600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtf2ird2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114674 MGI:2149780
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ncf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17969 MGI:97283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtf2i (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14886 MGI:1202722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	LOC630424 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:630424
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Gtf2ird1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57080 MGI:1861942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 10 mRNAs

name	LOC100039820 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 361 ESTs, 2 Proteins

name	Clip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269713 MGI:1313136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG666071 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666071 MGI:3645431
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Gm52 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214292 MGI:2684898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rfc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19718 MGI:1341868
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lat2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56743 MGI:1926479
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Eif4h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22384 MGI:1341822
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC638081 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:638081
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs

name	Limk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16885 MGI:104572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eln (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13717 MGI:95317
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wbscr28 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76629 MGI:1923879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cldn13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57255 MGI:1913102
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wbscr27 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:79565 MGI:1933146
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cldn4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12740 MGI:1313314
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cldn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12739 MGI:1329044
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abhd11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68758 MGI:1916008
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stx1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20907 MGI:109355
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wbscr22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66138 MGI:1913388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wbscr18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66114 MGI:1913364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vps37d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194309 MGI:2159402
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039731 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254609 GeneID:100039731
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 1373 ESTs, 5 Proteins product : similar to ribosomal protein L28 transcript_id : XM_001473924.1

name	LOC666038 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254617 GeneID:666038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 30 ESTs product : similar to Solute carrier family 35, member E3 transcript_id : XM_001475033.1

name	Gats (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:65301482 GeneID:80909 MGI:1933384
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : opposite strand transcription unit to Stag3 transcript_id : NM_030719.3

name	Wbscr16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15809009 GeneID:94254 MGI:2137600
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Williams-Beuren syndrome chromosome region 16 homolog (human) transcript_id : NM_033572.1

name	Gtf2ird2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716602 GeneID:114674 MGI:2149780
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTF2I repeat domain containing 2 transcript_id : NM_053266.1

name	Ncf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254579 GeneID:17969 MGI:97283
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neutrophil cytosolic factor 1 transcript_id : NM_010876.2

name	Gtf2i (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124001569 GeneID:14886 MGI:1202722
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I transcript_id : NM_001080748.1

name	Gtf2i (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124001577 GeneID:14886 MGI:1202722
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I transcript_id : NM_001080749.1

name	Gtf2i (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124001571 GeneID:14886 MGI:1202722
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I transcript_id : NM_010365.2

name	Gtf2i (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124001575 GeneID:14886 MGI:1202722
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I transcript_id : NM_001080747.1

name	Gtf2i (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124001573 GeneID:14886 MGI:1202722
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I transcript_id : NM_001080746.1

name	Gtf2ird1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125625338 GeneID:57080 MGI:1861942
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I repeat domain-containing 1 transcript_id : NM_001081466.1

name	Gtf2ird1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125625342 GeneID:57080 MGI:1861942
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I repeat domain-containing 1 transcript_id : NM_001081468.1

name	Gtf2ird1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125625346 GeneID:57080 MGI:1861942
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I repeat domain-containing 1 transcript_id : NM_001081470.1

name	Gtf2ird1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125625334 GeneID:57080 MGI:1861942
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I repeat domain-containing 1 transcript_id : NM_001081464.1

name	Gtf2ird1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125625344 GeneID:57080 MGI:1861942
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I repeat domain-containing 1 transcript_id : NM_001081469.1

name	Gtf2ird1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125625328 GeneID:57080 MGI:1861942
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I repeat domain-containing 1 transcript_id : NM_020331.2

name	Gtf2ird1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125625336 GeneID:57080 MGI:1861942
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I repeat domain-containing 1 transcript_id : NM_001081465.1

name	Gtf2ird1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125625332 GeneID:57080 MGI:1861942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I repeat domain-containing 1 transcript_id : NM_001081463.1

name	Gtf2ird1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125625340 GeneID:57080 MGI:1861942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I repeat domain-containing 1 transcript_id : NM_001081467.1

name	Gtf2ird1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125625330 GeneID:57080 MGI:1861942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II I repeat domain-containing 1 transcript_id : NM_001081462.1

name	LOC100039820 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254611 GeneID:100039820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 361 ESTs, 2 Proteins product : similar to ribosomal protein S28 transcript_id : XM_001474089.1

name	Clip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85662405 GeneID:269713 MGI:1313136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CAP-GLY domain containing linker protein 2 transcript_id : NM_001039162.1

name	Clip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85662409 GeneID:269713 MGI:1313136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CAP-GLY domain containing linker protein 2 transcript_id : NM_009990.2

name	EG666071 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254619 GeneID:666071 MGI:3645431
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG666071 transcript_id : XM_981349.2

name	Gm52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701451 GeneID:214292 MGI:2684898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 52, (NCBI) transcript_id : NM_001013751.1

name	Rfc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50263039 GeneID:19718 MGI:1341868
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : replication factor C (activator 1) 2 transcript_id : NM_020022.2

name	Lat2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71061471 GeneID:56743 MGI:1926479
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : linker for activation of T cells family, member 2 transcript_id : NM_022964.3

name	Lat2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71061475 GeneID:56743 MGI:1926479
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : linker for activation of T cells family, member 2 transcript_id : NM_020044.2

name	Eif4h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15808987 GeneID:22384 MGI:1341822
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 4H transcript_id : NM_033561.1

name	LOC638081 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94375688 GeneID:638081
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs product : hypothetical LOC638081 transcript_id : XM_978099.1

name	Limk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:128485824 GeneID:16885 MGI:104572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM-domain containing, protein kinase transcript_id : NM_010717.2

name	Eln (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803194 GeneID:13717 MGI:95317
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : elastin transcript_id : NM_007925.3

name	Wbscr28 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352481 GeneID:76629 MGI:1923879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Williams-Beuren syndrome chromosome region 28 (human) transcript_id : NM_194065.2

name	Wbscr28 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369449 GeneID:76629 MGI:1923879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Williams-Beuren syndrome chromosome region 28 (human) transcript_id : NM_029681.2

name	Cldn13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385852 GeneID:57255 MGI:1913102
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 13 transcript_id : NM_020504.3

name	Wbscr27 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50355998 GeneID:79565 MGI:1933146
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Williams Beuren syndrome chromosome region 27 (human) transcript_id : NM_024479.2

name	Cldn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753439 GeneID:12740 MGI:1313314
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 4 transcript_id : NM_009903.1

name	Cldn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802289 GeneID:12739 MGI:1329044
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 3 transcript_id : NM_009902.3

name	Abhd11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21644576 GeneID:68758 MGI:1916008
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : abhydrolase domain containing 11 transcript_id : NM_145215.1

name	Stx1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131152 GeneID:20907 MGI:109355
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : syntaxin 1A (brain) transcript_id : NM_016801.3

name	Wbscr22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125988404 GeneID:66138 MGI:1913388
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Williams Beuren syndrome chromosome region 22 transcript_id : NM_025375.2

name	Wbscr18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125988406 GeneID:66114 MGI:1913364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Williams-Beuren syndrome chromosome region 18 homolog (human) transcript_id : NM_025362.3

name	Vps37d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362978 GeneID:194309 MGI:2159402
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vacuolar protein sorting 37D (yeast) transcript_id : NM_177574.2

name	LOC100039731 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254610 GeneID:100039731
definition	codon_start : 1 product : similar to ribosomal protein L28 protein_id : XP_001473974.1

name	LOC666038 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254618 GeneID:666038
definition	codon_start : 1 product : similar to Solute carrier family 35, member E3 protein_id : XP_001475083.1

name	Gats (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37674263 CCDS:CCDS19717.1 GeneID:80909 MGI:1933384
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : opposite strand transcription unit to Stag3 protein_id : NP_109644.2

name	Wbscr16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15809010 CCDS:CCDS19718.1 GeneID:94254 MGI:2137600
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005087 - Ran guanyl-nucleotide exchange factor activity [Evidence NAS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : RCC1-like G exchanging factor-like protein product : Williams-Beuren syndrome chromosome region 16 homolog protein_id : NP_291050.1

name	Gtf2ird2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716603 CCDS:CCDS19719.1 GeneID:114674 MGI:2149780
definition	codon_start : 1 product : gtf2ird2 protein_id : NP_444496.1

name	Ncf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254580 GeneID:17969 MGI:97283
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence TAS] [Evidence ISS] GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0016175 - superoxide-generating NADPH oxidase activity [Evidence IDA] [Evidence ISS] [Evidence IMP] GO_process : GO:0008283 - cell proliferation [Evidence IMP]; GO:0006968 - cellular defense response [Evidence IMP]; GO:0006118 - electron transport [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006691 - leukotriene metabolism [Evidence IMP]; GO:0006742 - NADP catabolism [Evidence ISS]; GO:0009617 - response to bacterium [Evidence IMP] codon_start : 1 exception : mismatches in translation note : NADPH oxidase subunit (47 kD); NADPH oxidase subunit (47kDa) product : neutrophil cytosolic factor 1 protein_id : NP_035006.2

name	Gtf2i (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124001570 GeneID:14886 MGI:1202722
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : isoform 4 is encoded by transcript variant 4; Bruton tyrosine kinase-associated protein 135; BTK-associated protein 135 product : general transcription factor II I isoform 4 protein_id : NP_001074217.1

name	Gtf2i (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124001578 GeneID:14886 MGI:1202722
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : isoform 5 is encoded by transcript variant 5; Bruton tyrosine kinase-associated protein 135; BTK-associated protein 135 product : general transcription factor II I isoform 5 protein_id : NP_001074218.1

name	Gtf2i (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124001572 GeneID:14886 MGI:1202722
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; Bruton tyrosine kinase-associated protein 135; BTK-associated protein 135 product : general transcription factor II I isoform 2 protein_id : NP_034495.2

name	Gtf2i (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124001576 GeneID:14886 MGI:1202722
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; Bruton tyrosine kinase-associated protein 135; BTK-associated protein 135 product : general transcription factor II I isoform 3 protein_id : NP_001074216.1

name	Gtf2i (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124001574 GeneID:14886 MGI:1202722
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; Bruton tyrosine kinase-associated protein 135; BTK-associated protein 135 product : general transcription factor II I isoform 1 protein_id : NP_001074215.1

name	Gtf2ird1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125625339 GeneID:57080 MGI:1861942
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform e is encoded by transcript variant 6; general transcription factor 3; binding factor for early enhancer; Williams-Beuren syndrome chromosome region 11; muscle TFII-I repeat domain-containing protein 1; general transcription factor II I -like; GTF2I repeat domain-containing 1; transcription factor GTF3 alpha 2; transcription factor GTF3 gamma 2 product : general transcription factor II I repeat domain-containing 1 isoform e protein_id : NP_001074935.1

name	Gtf2ird1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125625343 GeneID:57080 MGI:1861942
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform g is encoded by transcript variant 8; general transcription factor 3; binding factor for early enhancer; Williams-Beuren syndrome chromosome region 11; muscle TFII-I repeat domain-containing protein 1; general transcription factor II I -like; GTF2I repeat domain-containing 1; transcription factor GTF3 alpha 2; transcription factor GTF3 gamma 2 product : general transcription factor II I repeat domain-containing 1 isoform g protein_id : NP_001074937.1

name	Gtf2ird1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125625347 GeneID:57080 MGI:1861942
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform i is encoded by transcript variant 10; general transcription factor 3; binding factor for early enhancer; Williams-Beuren syndrome chromosome region 11; muscle TFII-I repeat domain-containing protein 1; general transcription factor II I -like; GTF2I repeat domain-containing 1; transcription factor GTF3 alpha 2; transcription factor GTF3 gamma 2 product : general transcription factor II I repeat domain-containing 1 isoform i protein_id : NP_001074939.1

name	Gtf2ird1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125625335 GeneID:57080 MGI:1861942
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform d is encoded by transcript variant 4; general transcription factor 3; binding factor for early enhancer; Williams-Beuren syndrome chromosome region 11; muscle TFII-I repeat domain-containing protein 1; general transcription factor II I -like; GTF2I repeat domain-containing 1; transcription factor GTF3 alpha 2; transcription factor GTF3 gamma 2 product : general transcription factor II I repeat domain-containing 1 isoform d protein_id : NP_001074933.1

name	Gtf2ird1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125625337 GeneID:57080 MGI:1861942
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform d is encoded by transcript variant 5; general transcription factor 3; binding factor for early enhancer; Williams-Beuren syndrome chromosome region 11; muscle TFII-I repeat domain-containing protein 1; general transcription factor II I -like; GTF2I repeat domain-containing 1; transcription factor GTF3 alpha 2; transcription factor GTF3 gamma 2 product : general transcription factor II I repeat domain-containing 1 isoform d protein_id : NP_001074934.1

name	Gtf2ird1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125625345 GeneID:57080 MGI:1861942
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform h is encoded by transcript variant 9; general transcription factor 3; binding factor for early enhancer; Williams-Beuren syndrome chromosome region 11; muscle TFII-I repeat domain-containing protein 1; general transcription factor II I -like; GTF2I repeat domain-containing 1; transcription factor GTF3 alpha 2; transcription factor GTF3 gamma 2 product : general transcription factor II I repeat domain-containing 1 isoform h protein_id : NP_001074938.1

name	Gtf2ird1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125625329 GeneID:57080 MGI:1861942
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; general transcription factor 3; binding factor for early enhancer; Williams-Beuren syndrome chromosome region 11; muscle TFII-I repeat domain-containing protein 1; general transcription factor II I -like; GTF2I repeat domain-containing 1; transcription factor GTF3 alpha 2; transcription factor GTF3 gamma 2 product : general transcription factor II I repeat domain-containing 1 isoform a protein_id : NP_065064.2

name	Gtf2ird1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125625333 GeneID:57080 MGI:1861942
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant 3; general transcription factor 3; binding factor for early enhancer; Williams-Beuren syndrome chromosome region 11; muscle TFII-I repeat domain-containing protein 1; general transcription factor II I -like; GTF2I repeat domain-containing 1; transcription factor GTF3 alpha 2; transcription factor GTF3 gamma 2 product : general transcription factor II I repeat domain-containing 1 isoform c protein_id : NP_001074932.1

name	Gtf2ird1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125625341 GeneID:57080 MGI:1861942
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform f is encoded by transcript variant 7; general transcription factor 3; binding factor for early enhancer; Williams-Beuren syndrome chromosome region 11; muscle TFII-I repeat domain-containing protein 1; general transcription factor II I -like; GTF2I repeat domain-containing 1; transcription factor GTF3 alpha 2; transcription factor GTF3 gamma 2 product : general transcription factor II I repeat domain-containing 1 isoform f protein_id : NP_001074936.1

name	Gtf2ird1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125625331 GeneID:57080 MGI:1861942
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; general transcription factor 3; binding factor for early enhancer; Williams-Beuren syndrome chromosome region 11; muscle TFII-I repeat domain-containing protein 1; general transcription factor II I -like; GTF2I repeat domain-containing 1; transcription factor GTF3 alpha 2; transcription factor GTF3 gamma 2 product : general transcription factor II I repeat domain-containing 1 isoform b protein_id : NP_001074931.1

name	LOC100039820 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254612 GeneID:100039820
definition	codon_start : 1 product : similar to ribosomal protein S28 protein_id : XP_001474139.1

name	Clip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85662406 GeneID:269713 MGI:1313136
definition	GO_component : GO:0005881 - cytoplasmic microtubule [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : isoform b is encoded by transcript variant 2; cytoplasmic linker protein 1, 115 kDa; cytoplasmic linker 2 product : cytoplasmic linker 2 isoform b protein_id : NP_001034251.1

name	Clip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85662410 GeneID:269713 MGI:1313136
definition	GO_component : GO:0005881 - cytoplasmic microtubule [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : isoform a is encoded by transcript variant 1; cytoplasmic linker protein 1, 115 kDa; cytoplasmic linker 2 product : cytoplasmic linker 2 isoform a protein_id : NP_034120.2

name	EG666071 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254620 GeneID:666071 MGI:3645431
definition	codon_start : 1 product : hypothetical protein protein_id : XP_986443.2

name	Gm52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701452 CCDS:CCDS19721.1 GeneID:214292 MGI:2684898
definition	codon_start : 1 product : envelope glycoprotein syncytin-A protein_id : NP_001013773.1

name	Rfc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11177922 CCDS:CCDS19722.1 GeneID:19718 MGI:1341868
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] codon_start : 1 note : replication factor C, 40 kDa product : replication factor C (activator 1) 2 protein_id : NP_064406.1

name	Lat2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45496830 GeneID:56743 MGI:1926479
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0043303 - mast cell degranulation [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; Williams-Beuren syndrome chromosome region 5 homolog; Williams-Beuren syndrome chromosome region 15 homolog product : linker for activation of T cells family, member 2 isoform b protein_id : NP_075253.2

name	Lat2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910604 GeneID:56743 MGI:1926479
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0043303 - mast cell degranulation [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; Williams-Beuren syndrome chromosome region 5 homolog; Williams-Beuren syndrome chromosome region 15 homolog product : linker for activation of T cells family, member 2 isoform a protein_id : NP_064428.1

name	Eif4h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15808988 CCDS:CCDS19723.1 GeneID:22384 MGI:1341822
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : Williams-Beuren syndrome chromosome region 1 homolog protein_id : NP_291039.1

name	LOC638081 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94375689 GeneID:638081
definition	codon_start : 1 product : hypothetical protein protein_id : XP_983193.1

name	Limk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754548 CCDS:CCDS19724.1 GeneID:16885 MGI:104572
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005925 - focal adhesion [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045773 - positive regulation of axon extension [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : LIM-domain containing, protein kinase protein_id : NP_034847.1

name	Eln (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542606 CCDS:CCDS19725.1 GeneID:13717 MGI:95317
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005201 - extracellular matrix structural constituent [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0030833 - regulation of actin filament polymerization [Evidence IMP]; GO:0043149 - stress fiber formation [Evidence IMP]; GO:0007519 - striated muscle development [Evidence IMP] codon_start : 1 note : tropoelastin product : elastin protein_id : NP_031951.2

name	Wbscr28 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34732713 GeneID:76629 MGI:1923879
definition	codon_start : 1 note : isoform a is encoded by transcript variant 1; Williams-Beuren syndrome critical region 28 product : hypothetical protein LOC76629 isoform a protein_id : NP_919041.1

name	Wbscr28 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34732715 GeneID:76629 MGI:1923879
definition	codon_start : 1 note : isoform b is encoded by transcript variant 2; Williams-Beuren syndrome critical region 28 product : hypothetical protein LOC76629 isoform b protein_id : NP_083957.1

name	Cldn13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10048432 GeneID:57255 MGI:1913102
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence IEA] GO_function : GO:0005198 - structural molecule activity [Evidence IEA] codon_start : 1 note : claudin-13 product : claudin 13 protein_id : NP_065250.1

name	Wbscr27 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50355999 CCDS:CCDS19727.1 GeneID:79565 MGI:1933146
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : Williams-Beuren syndrome chromosome region 27 homolog product : Williams-Beuren syndrome critical region protein 27 protein_id : NP_077799.2

name	Cldn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753440 CCDS:CCDS19728.1 GeneID:12740 MGI:1313314
definition	GO_component : GO:0016021 - integral to membrane [Evidence NAS]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence IEA] [Evidence IDA] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS] codon_start : 1 product : claudin 4 protein_id : NP_034033.1

name	Cldn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753438 CCDS:CCDS19729.1 GeneID:12739 MGI:1329044
definition	GO_component : GO:0016021 - integral to membrane [Evidence NAS]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence IEA] [Evidence IDA] GO_function : GO:0042802 - identical protein binding [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence IDA] codon_start : 1 product : claudin 3 protein_id : NP_034032.1

name	Abhd11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21644577 CCDS:CCDS19730.1 GeneID:68758 MGI:1916008
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0006725 - aromatic compound metabolism [Evidence IEA] codon_start : 1 note : Williams-Beuren syndrome critical region 21; Williams Beuren syndrome chromosome region 21 product : abhydrolase domain containing 11 protein_id : NP_660250.1

name	Stx1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15011853 CCDS:CCDS19731.1 GeneID:20907 MGI:109355
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0008565 - protein transporter activity [Evidence IEA]; GO:0000149 - SNARE binding [Evidence IDA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : syntaxin 1 a product : syntaxin 1A (brain) protein_id : NP_058081.2

name	Wbscr22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125988405 CCDS:CCDS19732.1 GeneID:66138 MGI:1913388
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : Williams-Beuren syndrome critical region protein 22 protein_id : NP_079651.2

name	Wbscr18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21644569 GeneID:66114 MGI:1913364
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 product : Williams-Beuren syndrome critical region 18 protein_id : NP_079638.2

name	Vps37d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243920 CCDS:CCDS19733.1 GeneID:194309 MGI:2159402
definition	codon_start : 1 note : Williams-Beuren syndrome critical region protein 24; Williams-Beuren syndrome chromosome region 24 homolog product : vacuolar protein sorting 37D protein_id : NP_808242.1

name	LOC100039750 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039750
definition	number : 1 pseudo : _no_value

name	LOC630424 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630424
definition	number : 1 pseudo : _no_value

name	LOC630424 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630424
definition	number : 2 pseudo : _no_value

clone name	MSMg01-454E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193L21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-419N07.T7 (MSMg01no419_n07.b1)	MSMg01-419N07.TJ (MSMg01no419_n07.g1)
ACC	AG514839	AG514840
length	804	772
length of high quality (start - end)	245 (78 - 322)	480 (72 - 551)
definition	CHROMAT_FILE: MSMg01no419_n07.b1 PHD_FILE: MSMg01no419_n07.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:39:29 2005	CHROMAT_FILE: MSMg01no419_n07.g1 PHD_FILE: MSMg01no419_n07.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:39:29 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TTCCCTTTTTAAAATTTGGGCCCGCTAAAGAATCACATTCTAGAGAGATC CGCGGAATTCTGCGATTCACCGACATGTGCCACCATGCCTGGCTTATTTT TCCTGTTGCAGAGGTAGGTACCCAGATGCTGAAGAAGTAAGGCCTGTTCA ACACTGTACAAATTTTGTATGTGTAAATCAGATTCTAAGTAGAGACTGAA AATATTCCCAACCCCTCTCACTTTCGATAAAGTCTAATGAATGAGCAATT ATTGGTTTAAAAACATAAATTACACTGGGATGTGGTGGTGCACACCTTTA ATCTCAGCACCTGGGAGGCAGATGTTTTATAGGGGCAGAGGGGCAGAGGG GCAGAGGGGCAGAGGGGCAGAGGGGCAGAGGGGCAGAGGGGCAGAGGGGC AGAGGGGCAGAGGGCCCCAGGCGCATAGCGTCTTAAGGGCATAGGGGCTT AGGGCCTTAATTTTTTAATTTCTTTAATAGCTCTATAGGTCAACGTTCAC ACTTTTTACTTTCCTATTTCCCCTATCTCTTTATTCTCTCCCCTTTCTAC CTTTCTCCCTCTTTTAACCCCCTCATTTTTTTTCTCCCCTCCCCTTCCTT ATCCACAAATTCTCCTTTCCTTTTTTTTCTCCCTCCCTCCACTTCCCCTT ATTTTTTTTTCTCCATTTTCCCACCCTTCCCCCTCCCCTTTATTTTCTTC TCCCCCCTTTATTCCCCTTCCCTTTTTCCCCTTACCTTTTTATTTTCTTT TTTTCCCCCCCCTTCTCTCTTCTCCTCTCTTTTTTCCCCTTTTTTCCCCC TTTC	ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXAGAGGGTCGATTTCCTGTCCAGGATGCTG CCGTGAGACTTTTCCAGGAGAGATGTTAGGAAATAACCTGCACATCCCAG ATACAGAGGACACACAGACAGCACAAAGTACAATCTAACCTAGTCTAACC CGGTCAACCAATGAGTTTATTAGGGTTCCTTACAATGAGCATGGGTGAGG AGTTACTTACAAAGCATAAATGATTTACTCAGAATAGGATCTTTCCTGAG AAGACAAGTTCTGAGGCTGCTTAGATGTTCAGTGGCTAAGAGCACGTGCT GTTCTTGCCTGGGGAATGAGTTTGGTTCCCTGGACCCCTATCAAGAAGCT CAGAGCCACCTGAAAAGCCAGCTTCAGGGAGCCTCTGGCCTCCTCAAGTA TCCTCACACATGTGTACACACAGCACACCCACGCACACACGCACATGCAC ACACATGCACACATGCACATGCATACATATAAGTTAAATAAGCATTTTTT TAACAAGGTAGGGAGAGAGAGTTGCATGGATACTAATAGTGAACATGAAG GGAATACAGCCGCCCTGTGAAAAAAAGATATTTGGGTTACAGCTTCCCCA CCATCTATCTCTCTTCTGATTGGACACAGGCCCTCCTATTCTGGAAGGTC TTTATTCATCTTGGCCTATACAACTCCTTATTTTGCGAGGGTTTGTTCCT CTTTTGTAATCCCCTTCTTCCN
quality values	Open. Hide. 10 10 10 21 21 15 15 7 7 8 8 11 13 15 11 10 10 9 13 8 8 8 8 8 8 8 9 21 17 9 8 8 6 6 8 8 6 6 7 7 6 6 9 9 9 8 8 8 8 8 12 16 16 15 16 16 10 11 11 25 23 23 9 9 7 7 7 7 7 7 7 9 11 12 12 21 12 21 19 27 33 33 33 33 37 47 39 48 57 59 57 57 50 27 27 23 43 43 48 48 57 57 36 36 25 34 31 42 42 24 27 20 31 28 59 47 57 42 43 37 36 36 22 22 22 32 38 42 47 48 44 44 42 42 42 42 42 43 57 48 59 42 42 33 44 42 42 42 47 47 47 57 57 57 57 54 50 50 36 32 32 43 43 35 50 50 36 35 35 43 43 43 52 52 52 59 57 44 43 24 24 12 19 19 44 32 43 43 41 44 43 43 32 32 32 37 37 43 37 43 57 47 44 37 43 43 43 43 43 43 36 43 36 44 36 43 35 35 32 43 43 52 44 44 29 29 29 36 36 44 44 36 32 20 32 32 43 44 32 37 35 32 28 20 20 20 32 40 48 48 57 57 57 54 54 43 43 43 43 43 46 46 47 47 47 47 47 48 48 46 46 43 43 43 43 44 43 39 43 46 50 48 46 46 48 48 57 43 43 48 42 42 43 43 43 47 57 59 57 57 48 48 48 37 37 33 33 39 37 37 43 47 37 33 37 30 28 28 18 16 9 9 9 9 9 15 12 15 15 15 15 18 30 28 46 47 30 30 14 21 15 30 27 42 32 32 23 28 26 33 31 32 30 30 32 39 33 32 28 21 13 13 13 21 18 23 18 23 15 23 23 34 26 23 20 20 17 17 17 30 30 30 28 28 23 23 20 28 32 33 32 28 23 12 8 8 8 8 15 17 18 19 12 15 15 17 17 19 17 19 15 13 12 11 9 10 8 8 7 9 11 12 12 12 12 12 12 11 8 8 10 8 8 8 8 8 8 8 9 10 10 10 10 10 11 12 11 10 13 13 9 9 9 21 16 16 12 9 9 8 8 8 10 16 20 10 10 9 9 12 13 15 14 10 10 10 10 11 15 10 9 9 6 6 6 6 8 6 9 9 9 8 8 8 8 8 9 10 8 8 8 10 10 12 8 8 8 8 10 11 14 10 8 8 10 10 10 13 13 10 10 8 8 8 8 8 8 8 8 8 8 9 9 9 9 14 10 11 11 11 10 9 8 10 10 10 13 9 9 8 8 9 12 10 8 8 8 13 8 8 8 8 8 8 6 6 8 8 11 9 10 9 9 9 9 8 9 14 18 25 19 18 9 9 12 14 15 8 8 8 8 8 8 9 10 12 10 15 15 12 11 11 15 12 9 9 9 9 8 8 8 10 8 8 9 16 13 12 8 8 9 10 11 23 15 11 11 8 8 8 8 8 10 16 10 10 10 17 13 10 10 10 10 12 21 19 22 16 14 11 11 11 14 12 23 18 20 19 12 12 16 17 12 8 8 8 8 18 28 18 15 12 12 13 11 9 10 10 11 11 15 10 10 13 13 7 7 6 6 6 7 7 9 13 13 11 10 10 12 12 12 19 15 19 20 20 23 12 12 9 9 9 10 12 8 12 7 6 8 8 14 10 11 10 15 9 9 12 15 13 7 6 8 6 6 8 8 12 13 14 9 9 9 15 13 9 9 9 15 15 28 23 23 28 28 27 18 14 11 9 11 10 11 8 8 8 8 8 8 11 13 9 8 8 7 7 13 10 19 19 16 14 16 11 14 14 30 28 24 28 20 14 14 9 9 9 15 10 11 11 14 16 14 11	Open. Hide. 7 7 7 8 17 16 19 12 14 19 25 25 39 39 41 39 39 39 39 39 39 39 44 39 21 25 11 10 7 8 7 8 8 12 9 10 10 17 22 32 33 33 36 36 38 38 36 36 33 33 39 37 37 35 21 15 8 8 8 9 18 27 23 23 28 23 31 31 31 36 36 36 36 36 47 50 50 53 50 50 50 53 53 53 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 54 68 68 68 68 68 51 51 50 50 50 50 68 68 50 51 50 50 47 51 57 68 68 68 51 51 50 50 50 51 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 50 50 50 50 50 57 59 57 57 57 57 54 54 54 57 57 57 68 68 68 68 59 59 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 59 59 68 68 59 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 68 68 59 59 59 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 54 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 50 50 57 57 57 57 59 59 59 59 59 59 59 59 41 31 18 15 9 9 9 9 13 17 39 39 47 50 50 50 50 50 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 50 50 48 48 54 54 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 68 68 68 68 68 50 57 57 57 52 57 54 57 57 68 57 57 57 57 57 57 57 57 57 57 57 50 50 35 50 50 57 57 57 57 48 48 48 57 57 57 57 57 59 59 59 59 59 59 59 59 48 44 44 43 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 57 57 59 43 43 39 39 37 43 47 48 54 54 44 44 28 23 23 28 34 43 57 50 48 42 33 28 25 28 36 40 32 37 19 21 15 19 19 24 18 15 12 13 28 30 43 43 39 39 37 37 35 30 25 18 18 18 17 19 27 37 37 37 32 34 37 28 28 19 8 8 8 8 10 8 18 18 27 32 22 14 14 16 16 17 19 23 12 12 12 23 19 27 27 22 19 19 25 24 17 14 14 14 13 15 10 11 12 19 20 24 18 20 19 24 14 12 11 14 14 14 20 9 9 8 8 8 8 10 9 9 9 9 7 9 9 8 8 8 10 11 9 9 9 9 8 13 9 11 11 11 18 9 11 9 11 10 10 8 10 8 10 11 10 13 13 13 15 10 8 8 8 8 10 8 8 8 8 8 10 10 9 9 8 8 10 8 8 6 6 6 6 6 8 8 8 8 8 10 8 10 9 9 8 8 6 8 6 6 8 8 11 10 10 11 12 10 8 8 8 8 12 9 9 7 8 8 8 10 8 8 6 6 8 8 8 8 9 8 6 6 6 10 8 10 10 11 11 11 11 11 17 11 8 8 8 8 8 8 8 10 8 8 8 8 8 8 9 9 9 10 10 12 18 9 8 8 8 8 8 13 17 11 9 9 9 9 9 9 10 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no419_n07.b1 MSMg01no419_n07.b1 CHROMAT_FILE:
MSMg01no419_n07.b1 PHD_FILE: MSMg01no419_n07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:29 2005
         (245 letters)



>mm_chr5_134560411_134561055
          Length = 645

 Score =  443 bits (229), Expect = e-129
 Identities = 241/245 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgccaccatgcctggcttatttttcctgttgcagaggtaggtacccagatgctgaagaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tgccaccatgcctggcttatttttcctgttgcagaggtaggtacccagatgctgaagaag 338

                                                                       
Query: 61  taaggcctgttcaacactgtacaaattttgtatgtgtaaatcagattctaagtagagact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 taaggcctgttcaacactgtacaaattttgtatgtgtaaatcagattctaagtagagact 278

                                                                       
Query: 121 gaaaatattcccaacccctctcactttcgataaagtctaatgaatgagcaattattggtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gaaaatattcccaacccctctcactttcgataaagtctaatgaatgagcaattattggtt 218

                                                                       
Query: 181 taaaaacataaattacactgggatgtggtggtgcacacctttaatctcagcacctgggag 240
           ||||||| |||||||||||||| |||||||| ||||||||| ||||||||||||||||||
Sbjct: 217 taaaaacgtaaattacactgggctgtggtggcgcacaccttcaatctcagcacctgggag 158

                
Query: 241 gcaga 245
           |||||
Sbjct: 157 gcaga 153


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space:   150096
Effective search space used:   150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information