Query= MSMg01no419_p04.b1 MSMg01no419_p04.b1 CHROMAT_FILE:
MSMg01no419_p04.b1 PHD_FILE: MSMg01no419_p04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:38 2005
(352 letters)
>mm_chr5_64169775_64170526
Length = 752
Score = 627 bits (324), Expect = 0.0
Identities = 345/352 (98%)
Strand = Plus / Plus
Query: 1 caatgatggggaaacccttgggcaaacaggtttgtagctggtgcccactgagaatggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgatggggaaacccttgggcaaacaggtttgtagctggtgcccactgagaatggtta 260
Query: 61 acattctcaatattacttatgaatccataaatattacatatatacttccaagttaataca 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acattttcaatattacttatgaatccataaatattacatatatacttccaagttaataca 320
Query: 121 atggtaaaatacagcttcaacaaaacttagctcagccaggtccggtggcacaagcctgaa 180
||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
Sbjct: 321 atggtaaaatacagcttcaacaaaacttagctcagccaggtccagtggcacaggcctgta 380
Query: 181 atgactactatgggaggttgaagcagaaggattgcaattttgaggcctatctgggattga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgactactatgggaggttgaagcagaaggattgcaattttgaggcctatctgggattga 440
Query: 241 atagagtttatagctagcgttgataatctagtgacatcctgccaaaaaagggctgtggtg 300
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atagagtttaaagccagcgttgataatctagtgacatcctgccaaaaaagggctgtggtg 500
Query: 301 tagctcagtcataaatgtcttgcctagcactcatgagacccaaaggaagtgg 352
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagctcagtcataaatgtcttgcctagcactcatgagacccaaaggaagtgg 552
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_p04.g1 MSMg01no419_p04.g1 CHROMAT_FILE:
MSMg01no419_p04.g1 PHD_FILE: MSMg01no419_p04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:38 2005
(456 letters)
>mm_chr5_64320292_64321146
Length = 855
Score = 781 bits (404), Expect = 0.0
Identities = 443/458 (96%), Gaps = 5/458 (1%)
Strand = Plus / Minus
Query: 1 ttgtggtagacagaagggttggagaaggcaagc--tgttagctcggagtcaaagagcagg 58
||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 655 ttgtggtagacagtagggttggagaaggcaagctatg---gctcggagtcaaagagcagg 599
Query: 59 ttcagagcttgagagtggtcgtgtcctgcctccagtgtgtaggtgactgctggttgatgc 118
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 598 ttcagagcttgagagtggtcgtgtcctgcctccagtgtgcaggtgactgctggttgatgc 539
Query: 119 acaagttaactgagcctgctgagttccagatccttatctgcaaaccactgtgctaacttc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 acaagttaactgagcctgctgagttccagatccttatctgcaaaccactgtgctaacttc 479
Query: 179 cttcaattattaccaggactatagagcacttccggtcctgcgagacctttatgaacaaca 238
|||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||
Sbjct: 478 attcaattattaccaggactatagagcgcttccagtcctgtgagacctttatgaacaaca 419
Query: 239 gtaactaaatgataacctggtcagtttggattacctgctaccatctgtttttgtgttact 298
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 418 gtaactaaatgataacctggtcggtttggattacctgctaccatctgtttttgtgttact 359
Query: 299 ggttataggttgtggttgttgggcgccagattcccctgtaattagttacagataactata 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ggttataggttgtggttgttgggcgccagattcccctgtaattagttacagataactata 299
Query: 359 catctagacagtcctcaatttctgtaactaggaacgttgactgagtaaatggttcagtgc 418
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 298 tgtctagacagtcctcaatttctgtaactaggaacgttgactgggtaaatggttcagtgc 239
Query: 419 tggatagaacaggacagtcacagatctttgctctggaa 456
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tggatagaacaggacagtcacagatctttgctctggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 855
Length adjustment: 10
Effective length of query: 446
Effective length of database: 845
Effective search space: 376870
Effective search space used: 376870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
