Query= MSMg01no419_p12.b1 MSMg01no419_p12.b1 CHROMAT_FILE:
MSMg01no419_p12.b1 PHD_FILE: MSMg01no419_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:40 2005
(136 letters)
>mm_chr5_36664898_36665433
Length = 536
Score = 263 bits (136), Expect = 3e-75
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 1 agactttctgaccttccctgtgggtcatggccagaggaaggactgagctggacttctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agactttctgaccttccctgtgggtcatggccagaggaaggactgagctggacttctgaa 260
Query: 61 gtggggggaagggcagagtgtgacagaaggaacacaaagtagcattcagactaggggcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggggggaagggcagagtgtgacagaaggaacacaaagtagcattcagactaggggcac 320
Query: 121 ggctgcgtcctgatga 136
||||||||||||||||
Sbjct: 321 ggctgcgtcctgatga 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 136
Length of database: 536
Length adjustment: 8
Effective length of query: 128
Effective length of database: 528
Effective search space: 67584
Effective search space used: 67584
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no419_p12.g1 MSMg01no419_p12.g1 CHROMAT_FILE:
MSMg01no419_p12.g1 PHD_FILE: MSMg01no419_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:40 2005
(506 letters)
>mm_chr5_36828776_36829680
Length = 905
Score = 903 bits (467), Expect = 0.0
Identities = 476/479 (99%), Gaps = 1/479 (0%)
Strand = Plus / Minus
Query: 28 cagacgtggccttgcatgcctgaaacctggtgttggggaacagagacaagcagatcccag 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 cagacgtggccttgcatgcctgaaacctggtgttggggaacagagacaagcagatcccag 846
Query: 88 gatcatcatgctagctggactagcccaaacggcaaagttccaattgagtaagagaccctg 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gatcatcatgctagctggactagcccaaacggcaaagttccaattgagtaagagaccctg 786
Query: 148 tctgaaaaaaatcaaggtggcatacaggagatgccccatatgttcctcaggccttcatat 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 tctgaaaaaaatcaaggtggcatacaggagatgccccatatgttcctcaggccttcatat 726
Query: 208 gaccacacacacctgcacactgagagatgggaatttatgatgtttatcaggtcagtgatt 267
|||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 725 gaccacacacacctgcacactgagagatgggaatttatga-gctaatcaggtcagtgatt 667
Query: 268 caatactcttaagtttaattagtacaaagatgacttgagtcatcagatcagtgcatagag 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 caatactcttaagtttaattagtacaaagatgacttgagtcatcagatcagtgcatagag 607
Query: 328 attttctgtaccttgcccactcatttaagccatccttagacataggcaagagacagttct 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 attttctgtaccttgcccactcatttaagccatccttagacataggcaagagacagttct 547
Query: 388 aacactcctttagactggggctacttggctataaaggcttttcactagaagtcagtttaa 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aacactcctttagactggggctacttggctataaaggcttttcactagaagtcagtttaa 487
Query: 448 tcaccgcactctctagatatatttttcttaagctcatgtagagctactgctagctggaa 506
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tcaccgcactctctagatatatttttcttaagctcatgtagagctactgctagctggaa 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 905
Length adjustment: 10
Effective length of query: 496
Effective length of database: 895
Effective search space: 443920
Effective search space used: 443920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
