Query= MSMg01no424_e10.b1 MSMg01no424_e10.b1 CHROMAT_FILE:
MSMg01no424_e10.b1 PHD_FILE: MSMg01no424_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:12 2005
(521 letters)
>mm_chr5_77944014_77944935
Length = 922
Score = 888 bits (459), Expect = 0.0
Identities = 504/519 (97%), Gaps = 1/519 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaacattacctcacacctacaggataagtgctttgcccagaaccatcactcca 63
||||||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 722 ggaattcaaacacaacctcacacctacacgataagtgctttgcccagaaccatcgctcca 663
Query: 64 gatcccacatgcagagttccctgtgtagacattccttttgaatgaggtctccatgtttgc 123
| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 662 gctcccacatgcagagttccccgtgtagacattccttttgaatgaggtctccgtgtttgc 603
Query: 124 tcacttatttaggaatggcatgagagaatgacacaggtatgtgacaaagagtcctcatac 183
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 602 tcacttatttaggaatggcatgagagaatgacacaggtatgtgacaaagagccctcatac 543
Query: 184 cctcggggg-ttgggggagttaggggacagttccttgatttccgtaaagttgtgaaacca 242
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 542 cctcgggggtttgggggagttaggggacagttccttgatttccgtaaagttgtgaaacaa 483
Query: 243 caaaacctatgtttctttaagcatgggtgtgttaggctgtttttcgtgatccaatcagag 302
||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 482 caaaatctatgtttctttaagcatgggtgtgcaaggctgtttttcgtgatccaatcagag 423
Query: 303 tgtcctggagcagataagctcacaaatgtttaatacatgatcaagtgcatctcggcgctt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgtcctggagcagataagctcacaaatgtttaatacatgatcaagtgcatctcggcgctt 363
Query: 363 ccagctaatgaattattccaggaagctctgagagacaagcatcaatcaaacattcgaacc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccagctaatgaattattccaggaagctctgagagacaagcatcaatcaaacattcgaacc 303
Query: 423 acctcacccttcctcaaggtgaaaaagtaaaacaactgcattatccgtgtgacaatcgct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acctcacccttcctcaaggtgaaaaagtaaaacaactgcattatccgtgtgacaatcgct 243
Query: 483 cggttttatttggagctgcgttccactctgaccatcaga 521
||||||||||||||||||||||||||| |||||||||||
Sbjct: 242 cggttttatttggagctgcgttccactatgaccatcaga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 922
Length adjustment: 10
Effective length of query: 511
Effective length of database: 912
Effective search space: 466032
Effective search space used: 466032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_e10.g1 MSMg01no424_e10.g1 CHROMAT_FILE:
MSMg01no424_e10.g1 PHD_FILE: MSMg01no424_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:12 2005
(246 letters)
>mm_chr5_77780520_77781169
Length = 650
Score = 441 bits (228), Expect = e-128
Identities = 243/250 (97%), Gaps = 4/250 (1%)
Strand = Plus / Plus
Query: 1 tgctttgaacttaggcaagcaggattctcttaattcctattttttttttttt----aaac 56
|||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||
Sbjct: 201 tgctttgaacttaggcaagcaggattctcttaattcttttttttttttttttttttaaac 260
Query: 57 aaagtaacttcagttcttccattagttcctgtagctgtatctgtacgaccacagcagggc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagtaacttcagttcttccattagttcctgtagctgtatctgtacgaccacagcagggc 320
Query: 117 tgcttcgaagaaatgggaggagaataatttcaggcaggtgacctttgccaagcctgggtg 176
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 tgcttcgaagaaatgggaggagaataatttcaggcaggcgacctttgccaagcctgggtg 380
Query: 177 ttctgagaatgaaacggttgccagctcttgctacttaccagcacccagcccgttacttca 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctgagaatgaaacggttgccagctcttgctacttaccagcacccagcccgttacttca 440
Query: 237 tgcttttctg 246
||||||||||
Sbjct: 441 tgcttttctg 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 650
Length adjustment: 9
Effective length of query: 237
Effective length of database: 641
Effective search space: 151917
Effective search space used: 151917
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
